RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 HEATR5AQ86XA9 2040 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 NAXEQ8NCW5 288 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 SLC5A11Q8WWX8 675 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 ASB15Q8WXK1 588 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 FBXL8Q96CD0 374 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 ARSGQ96EG1 525 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 LINGO1Q96FE5 620 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 SIGLEC10Q96LC7 697 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 MDFIQ99750 246 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 BAG1Q99933 345 aaPredicted RBP12.24□□□□□ -0.45
USF1-206ENST00000491629 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
USF1-206ENST00000491629 TUBA8Q9NY65 449 aaPredicted RBP12.24□□□□□ -0.45
USF1-206ENST00000491629 STAB1Q9NY15 2570 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 SDR42E2A6NKP2 422 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 GOLGA8MH3BSY2 632 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 ACOT7O00154 380 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 PSMD12O00232 456 aaPredicted RBP12.23□□□□□ -0.45
USF1-206ENST00000491629 SYT5O00445 386 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 SUSD5O60279 629 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 ZFAND5O76080 213 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 ATE1O95260 518 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 SERPINA6P08185 405 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 CNR1P21554 472 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 HOXC12P31275 282 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 HNRNPH1P31943 449 aaKnown RBP12.23□□□□□ -0.45
USF1-206ENST00000491629 GPS1Q13098 491 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 HYAL4Q2M3T9 481 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 NDUFAF5Q5TEU4 345 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 TMEM198Q66K66 360 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 TTC27Q6P3X3 843 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 PAMR1Q6UXH9 720 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 CLNKQ7Z7G1 428 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 PRIMA1Q86XR5 153 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 GPALPP1Q8IXQ4 340 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 FAM109AQ8N4B1 249 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 RNF10Q8N5U6 811 aaKnown RBP12.23□□□□□ -0.45
USF1-206ENST00000491629 C2CD4AQ8NCU7 369 aaPredicted RBP12.23□□□□□ -0.45
USF1-206ENST00000491629 ARMC2Q8NEN0 867 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 MYRIPQ8NFW9 859 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 PTPMT1Q8WUK0 201 aaPredicted RBP12.23□□□□□ -0.45
USF1-206ENST00000491629 SERPINB12Q96P63 405 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 QRFPRQ96P65 431 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 FAM173AQ9BQD7 235 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 IL1RL2Q9HB29 575 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 PRTFDC1Q9NRG1 225 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 IARS2Q9NSE4 1012 aaKnown RBP12.23□□□□□ -0.45
USF1-206ENST00000491629 ARL15Q9NXU5 204 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 SAMD15Q9P1V8 674 aa12.23□□□□□ -0.45
USF1-206ENST00000491629 ATP6AP2A0A1C7CYW4 349 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 MAGEB16A2A368 324 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 KIAA1324LA8MWY0 1029 aaPredicted RBP12.22□□□□□ -0.45
USF1-206ENST00000491629 WDR1O75083 606 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 ATP6AP2O75787 350 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 GUCA1CO95843 209 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 FGGP02679 453 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 RFPL3SP0C7P2 107 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 MLNP12872 115 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 DGKQP52824 942 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 WNT3P56703 355 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 HSD17B7P56937 341 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 BTN3A2P78410 334 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 CSHL1Q14406 222 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 DEFB113Q30KQ7 82 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 FLYWCH1Q4VC44 716 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 RIPPLY2Q5TAB7 128 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 HECTD2Q5U5R9 776 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 LRRC8EQ6NSJ5 796 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 SBSNQ6UWP8 590 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 BIVMQ86UB2 503 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 MYO1HQ8N1T3 1032 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 FAM47BQ8NA70 645 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 MCUQ8NE86 351 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 TRPV3Q8NET8 790 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 CSF3RQ99062 836 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 CCDC77Q9BR77 488 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 PELI2Q9HAT8 420 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 PROK2Q9HC23 129 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 SH2D2AQ9NP31 389 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 ADAP2Q9NPF8 381 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 SLC17A6Q9P2U8 582 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 ACAD8Q9UKU7 415 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 GUCA1BQ9UMX6 200 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 ATG4BQ9Y4P1 393 aa12.22□□□□□ -0.45
USF1-206ENST00000491629 MXRA5Q9NR99 2828 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 CYR61O00622 381 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 AHSGP02765 367 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 UQCRC1P31930 480 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 PIGAP37287 484 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 MAN2A2P49641 1150 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 RGS4P49798 205 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 AP1S2P56377 157 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 RAB38P57729 211 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 SLC10A1Q14973 349 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 DAZAP2Q15038 168 aaPredicted RBP12.21□□□□□ -0.45
USF1-206ENST00000491629 RBBP5Q15291 538 aaKnown RBP12.21□□□□□ -0.45
USF1-206ENST00000491629 PPP1R3AQ16821 1122 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 RTL4Q6ZR62 310 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms