RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 DNAJB6O75190 326 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 IL12AP29459 219 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 AVPR1BP47901 424 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 LIM2P55344 173 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 KLC1Q07866 573 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 EIF3IQ13347 325 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 RUNX2Q13950 521 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 AGKQ53H12 422 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 FAM71E1Q6IPT2 247 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 FOXR1Q6PIV2 292 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 C6orf89Q6UWU4 347 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 GPR180Q86V85 440 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 FUNDC1Q8IVP5 155 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 RIMKLAQ8IXN7 391 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 MMABQ96EY8 250 aaPredicted RBP20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 NPLQ9BXD5 320 aaPredicted RBP20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 SLC7A5P2Q9GIP4 190 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 TXLNGQ9NUQ3 528 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 NDOR1Q9UHB4 597 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 WASF3Q9UPY6 502 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 WBP11Q9Y2W2 641 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 ATG4BQ9Y4P1 393 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 TMEM184BQ9Y519 407 aaPredicted RBP20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 PCDHB3Q9Y5E6 796 aa20.57■□□□□ 0.88
VCPKMT-204ENST00000491402 AKAP13Q12802 2813 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 PMS2P1A4D2B8 440 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 CCT8L1PA6NM43 557 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 H0YIG0 161 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 AKAP10O43572 662 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 PRMT3O60678 531 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 JMJD7P0C870 316 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 ETV5P41161 510 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 ZFP36L2P47974 494 aaKnown RBP20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 C21orf58P58505 322 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 RAB15P59190 212 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 MC1RQ01726 317 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 EFCAB3Q8N7B9 438 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 NUDT8Q8WV74 236 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 PMEPA1Q969W9 287 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 RNF31Q96EP0 1072 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 CLMPQ9H6B4 373 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 LYRM4Q9HD34 91 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 TMEM45AQ9NWC5 275 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 KCMF1Q9P0J7 381 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 EXO1Q9UQ84 846 aaKnown RBP20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 SCN2AQ99250 2005 aa20.56■□□□□ 0.88
VCPKMT-204ENST00000491402 PLD2O14939 933 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 RRP9O43818 475 aaKnown RBP20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 GUCY1B2O75343 617 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 C2orf80Q0P641 193 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 HEPACAMQ14CZ8 416 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 C3orf38Q5JPI3 329 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 NDUFAF5Q5TEU4 345 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 MMP21Q8N119 569 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 SLC38A9Q8NBW4 561 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 GLB1L3Q8NCI6 653 aaPredicted RBP20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 PHF11Q9UIL8 331 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 MAU2Q9Y6X3 613 aa20.55■□□□□ 0.88
VCPKMT-204ENST00000491402 A0A1W2PR48 441 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 SCAMP2O15127 329 aaKnown RBP20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 PROM1O43490 865 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 ADRB1P08588 477 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 HPCAL1P37235 193 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 CLNS1AP54105 237 aaKnown RBP20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 RCAN2Q14206 197 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 PRMT9Q6P2P2 845 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 GK5Q6ZS86 529 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 SHISA5Q8N114 240 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 CA13Q8N1Q1 262 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 TESCQ96BS2 214 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 ZBTB18Q99592 522 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 REEP4Q9H6H4 257 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 MS4A12Q9NXJ0 267 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 HCN3Q9P1Z3 774 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 PISDQ9UG56 409 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 CDC14AQ9UNH5 594 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 SATB2Q9UPW6 733 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 MAPRE3Q9UPY8 281 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 FAM234BA2RU67 622 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 EBAG9O00559 213 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 AIFM1O95831 613 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 NTRK1P04629 796 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 HBQ1P09105 142 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 FURINP09958 794 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 DDCP20711 480 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 OR1D4P47884 311 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 POLR2JP52435 117 aaKnown RBP20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 MAPK10P53779 464 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 UGT8Q16880 541 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 C1orf189Q5VU69 101 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 BLOC1S3Q6QNY0 202 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 CEACAM20Q6UY09 585 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 WDR36Q8NI36 951 aaKnown RBP20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 STARD8Q92502 1023 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 CLIP3Q96DZ5 547 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 CSF3RQ99062 836 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 FAIM2Q9BWQ8 316 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 MIEF1Q9NQG6 463 aa20.54■□□□□ 0.88
VCPKMT-204ENST00000491402 B3GALT1Q9Y5Z6 326 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms