RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 RCN2Q14257 317 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 HIST2H2BCQ6DN03 193 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 GRHL2Q6ISB3 625 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 UBE3DQ7Z6J8 389 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 CLNKQ7Z7G1 428 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 B3GNT7Q8NFL0 401 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 OR7G3Q8NG95 312 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 GPR78Q96P69 363 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 ROGDIQ9GZN7 287 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 KIF2AO00139 706 aaPredicted RBP29.31■■■□□ 2.28
LDB1-204ENST00000490751 RTCAO00442 366 aaKnown RBP29.31■■■□□ 2.28
LDB1-204ENST00000490751 CYR61O00622 381 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 LRRTM2O43300 516 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 KLK8O60259 260 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 TGFB1P01137 390 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 CD46P15529 392 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 MST1P26927 711 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 ALDH18A1P54886 795 aaKnown RBP29.31■■■□□ 2.28
LDB1-204ENST00000490751 TERF2Q15554 542 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 ZNF468Q5VIY5 522 aaPredicted RBP29.31■■■□□ 2.28
LDB1-204ENST00000490751 ZNF793Q6ZN11 406 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 APCDD1LQ8NCL9 501 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 SCMH1Q96GD3 660 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 PAFAH2Q99487 392 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 TBCDQ9BTW9 1192 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 DEFB126Q9BYW3 111 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 LRFN1Q9P244 771 aa29.31■■■□□ 2.28
LDB1-204ENST00000490751 CPSF2Q9P2I0 782 aaKnown RBP29.31■■■□□ 2.28
LDB1-204ENST00000490751 DOPEY1Q5JWR5 2465 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 TRBV11-1A0A0K0K1C0 115 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 LRRC14BA6NHZ5 514 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 SERPINB1P30740 379 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 MLF1P58340 268 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 TMEM35AQ53FP2 167 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 GFRALQ6UXV0 394 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 MYLK4Q86YV6 388 aaPredicted RBP29.3■■■□□ 2.28
LDB1-204ENST00000490751 PLD6Q8N2A8 252 aaKnown RBP29.3■■■□□ 2.28
LDB1-204ENST00000490751 HORMAD2Q8N7B1 307 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 LYRM4Q9HD34 91 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 IKBKGQ9Y6K9 419 aa29.3■■■□□ 2.28
LDB1-204ENST00000490751 NEURL1O76050 574 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 ATP5A1P25705 553 aaKnown RBP29.29■■■□□ 2.28
LDB1-204ENST00000490751 EEF1DP29692 281 aaKnown RBP29.29■■■□□ 2.28
LDB1-204ENST00000490751 CLCN2P51788 898 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 DDX39BQ13838 428 aaKnown RBP29.29■■■□□ 2.28
LDB1-204ENST00000490751 TECRLQ5HYJ1 363 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 CHSY3Q70JA7 882 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 RNF175Q8N4F7 328 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 ACOT4Q8N9L9 421 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 TMEM178AQ8NBL3 297 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 CMTM7Q96FZ5 175 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 ADAP2Q9NPF8 381 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 ZNF358Q9NW07 568 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 KCMF1Q9P0J7 381 aa29.29■■■□□ 2.28
LDB1-204ENST00000490751 MAST4O15021 2626 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 SAP18O00422 153 aaKnown RBP29.28■■■□□ 2.28
LDB1-204ENST00000490751 CDK2AP1O14519 115 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 STSP08842 583 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 SSR2P43308 183 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 MAGEA12P43365 314 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 SERPINB9P50453 376 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 PCBP2Q15366 365 aaKnown RBP eCLIP29.28■■■□□ 2.28
LDB1-204ENST00000490751 KHDRBS2Q5VWX1 349 aaKnown RBP29.28■■■□□ 2.28
LDB1-204ENST00000490751 TAOK1Q7L7X3 1001 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 UHMK1Q8TAS1 419 aaKnown RBP29.28■■■□□ 2.28
LDB1-204ENST00000490751 ISL2Q96A47 359 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 VMP1Q96GC9 406 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 MAPKAP1Q9BPZ7 522 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 OR51B5Q9H339 312 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 ACTR8Q9H981 624 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 SEC14L3Q9UDX4 400 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 ADGRE2Q9UHX3 823 aa29.28■■■□□ 2.28
LDB1-204ENST00000490751 PPIEQ9UNP9 301 aaKnown RBP29.28■■■□□ 2.28
LDB1-204ENST00000490751 POC1B-GALNT4F8VUJ3 575 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 CTNSO60931 367 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 UNC5CO95185 931 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 HIST1H1TP22492 207 aaPredicted RBP29.27■■■□□ 2.28
LDB1-204ENST00000490751 AP5B1Q2VPB7 878 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 LIPJQ5W064 366 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 SLC25A25Q6KCM7 469 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 GALNTL5Q7Z4T8 443 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 GOLGA7Q7Z5G4 137 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 ARMC10Q8N2F6 343 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 HUS1BQ8NHY5 278 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 KIF18AQ8NI77 898 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 THAP3Q8WTV1 239 aaPredicted RBP29.27■■■□□ 2.28
LDB1-204ENST00000490751 NCLNQ969V3 563 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 ZNF223Q9UK11 482 aaPredicted RBP29.27■■■□□ 2.28
LDB1-204ENST00000490751 FBXW2Q9UKT8 454 aa29.27■■■□□ 2.28
LDB1-204ENST00000490751 NAV2Q8IVL1 2488 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 SYNDIG1LA6NDD5 238 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 FCHO1O14526 889 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 SCELO95171 688 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 SIX3O95343 332 aaPredicted RBP29.26■■■□□ 2.27
LDB1-204ENST00000490751 CLDN1O95832 211 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 SP1P08047 785 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 CYB561P49447 251 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 PER3P56645 1201 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 GTF2H2Q13888 395 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 ELAVL1Q15717 326 aaKnown RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms