RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 LRRC6Q86X45 466 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 REXO1L1PQ8IX06 675 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 RHOT2Q8IXI1 618 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 PM20D2Q8IYS1 436 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 ZNF321PQ8N8H1 164 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 SLC44A1Q8WWI5 657 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 FAM129AQ9BZQ8 928 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 PROK2Q9HC23 129 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 SH2D2AQ9NP31 389 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 CCDC177Q9NQR7 707 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 ZNF226Q9NYT6 803 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 CDC42EP3Q9UKI2 254 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 RIMKLBQ9ULI2 386 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 BOKQ9UMX3 212 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 CLDN16Q9Y5I7 305 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 YLPM1P49750 1951 aaKnown RBP12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 MYOCOSA0A1B0GUC4 107 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 LRATO95237 230 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 CDH1P12830 882 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 ADRA1DP25100 572 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 GDF1P27539 372 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 HNF4AP41235 474 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 GRIA1P42261 906 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 SLCO1A2P46721 670 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 RAB8AP61006 207 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 FAM27E3Q08E93 113 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 CDH17Q12864 832 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 SF3B4Q15427 424 aaKnown RBP eCLIP12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 DCST1Q5T197 706 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 SLC22A10Q63ZE4 541 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 OPN5Q6U736 354 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 PLXDC2Q6UX71 529 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 SYDE1Q6ZW31 735 aaPredicted RBP12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 SCUBE1Q8IWY4 988 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 CA13Q8N1Q1 262 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 UTP15Q8TED0 518 aaKnown RBP12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 NTNG2Q96CW9 530 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 MARK4Q96L34 752 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 CALHM2Q9HA72 323 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 HOMER3Q9NSC5 361 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 QPCTLQ9NXS2 382 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 SLC6A5Q9Y345 797 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 MMACHCQ9Y4U1 282 aa12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.53□□□□□ -0.4
EXOSC3-207ENST00000490516 OR1F1O43749 312 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 CHRM3P20309 590 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 GRK3P35626 688 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 SOX18P35713 384 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 HNRNPFP52597 415 aaKnown RBP12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 RNF4P78317 190 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 PWP1Q13610 501 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 ASTE1Q2TB18 679 aaPredicted RBP12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 P3H1Q32P28 736 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 VASNQ6EMK4 673 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 NIPAL1Q6NVV3 410 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 LINC00523Q86TU6 105 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 C17orf64Q86WR6 236 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 KRT35Q92764 455 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 WDYHV1Q96HA8 205 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 MED18Q9BUE0 208 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 SFXN3Q9BWM7 321 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 BEX2Q9BXY8 128 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 ZNF148Q9UQR1 794 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 TCAF1Q9Y4C2 921 aa12.52□□□□□ -0.41
EXOSC3-207ENST00000490516 A8MXE2 369 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 C4orf51C9J302 202 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 PJA2O43164 708 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 PSMD3O43242 534 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 GPRIN2O60269 458 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 TRAPPC6AO75865 159 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 GAS8O95995 478 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 ZNF791Q3KP31 576 aaPredicted RBP12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 C6orf52Q5T4I8 152 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 CLNKQ7Z7G1 428 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 GCNT2Q8N0V5 402 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 PAQR8Q8TEZ7 354 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 ASB11Q8WXH4 323 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 ALKBH8Q96BT7 664 aaKnown RBP12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 INTS12Q96CB8 462 aaKnown RBP12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 ZC3HAV1LQ96H79 300 aaKnown RBP12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 ANP32EQ9BTT0 268 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 OR8D2Q9GZM6 311 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 RBSNQ9H1K0 784 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 ADAP2Q9NPF8 381 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 CHRAC1Q9NRG0 131 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 PRTFDC1Q9NRG1 225 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 CLCA3PQ9Y6N3 262 aa12.51□□□□□ -0.41
EXOSC3-207ENST00000490516 CTAGE15A4D2H0 777 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 ACSL3O95573 720 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 GYPCP04921 128 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 GDF10P55107 478 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 RGS1Q08116 209 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 ASPHQ12797 758 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 SLC13A2Q13183 592 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms