RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 PTGR1Q14914 329 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 TLR1Q15399 786 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 C17orf64Q86WR6 236 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 LAS2Q8IYD9 372 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 RNF175Q8N4F7 328 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 C2orf73Q8N5S3 287 aaPredicted RBP14.9□□□□□ -0.02
PCCB-218ENST00000490504 HUS1BQ8NHY5 278 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 UBE2E3Q969T4 207 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 GPATCH1Q9BRR8 931 aaKnown RBP14.9□□□□□ -0.02
PCCB-218ENST00000490504 EFHD1Q9BUP0 239 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 PELI2Q9HAT8 420 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 TMEM181Q9P2C4 612 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 PACSIN3Q9UKS6 424 aa14.9□□□□□ -0.02
PCCB-218ENST00000490504 GSAPA4D1B5 854 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 SLC9B1P1A6NJY1 282 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 TERTO14746 1132 aaKnown RBP14.89□□□□□ -0.03
PCCB-218ENST00000490504 KRT36O76013 467 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 NPPAP01160 153 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 CDH1P12830 882 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 RAB28P51157 221 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 CLNS1AP54105 237 aaKnown RBP14.89□□□□□ -0.03
PCCB-218ENST00000490504 NFYCQ13952 458 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 RCN1Q15293 331 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 GPR19Q15760 415 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 SAMD4BQ5PRF9 694 aaKnown RBP14.89□□□□□ -0.03
PCCB-218ENST00000490504 ATP1A1-AS1Q5TC04 95 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 ZNF605Q86T29 641 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 AMIGO1Q86WK6 493 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 STARD8Q92502 1023 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 CLMPQ9H6B4 373 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 AKIRIN1Q9H9L7 192 aaPredicted RBP14.89□□□□□ -0.03
PCCB-218ENST00000490504 IL1RL2Q9HB29 575 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 NKX1-2Q9UD57 310 aaPredicted RBP14.89□□□□□ -0.03
PCCB-218ENST00000490504 DLGAP4Q9Y2H0 992 aa14.89□□□□□ -0.03
PCCB-218ENST00000490504 BSNQ9UPA5 3926 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 MAGEB17A8MXT2 336 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 H0Y3Z8 333 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 FXYD1O00168 92 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 FOXE1O00358 373 aaPredicted RBP14.88□□□□□ -0.03
PCCB-218ENST00000490504 KDM1AO60341 852 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 FKBP6O75344 327 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 NTRK1P04629 796 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 SDC1P18827 310 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 CDH3P22223 829 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 PKLRP30613 574 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 DLSTP36957 453 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 SLC7A2P52569 658 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 CLDN8P56748 225 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 PHEXP78562 749 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 CCNIQ14094 377 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 PAGE3Q5JUK9 113 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 NOXRED1Q6NXP6 359 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 ADGRF3Q8IZF5 1079 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 CARFQ8N187 725 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 KRT78Q8N1N4 520 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 DPP10Q8N608 796 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 LRRC58Q96CX6 371 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 FCRL4Q96PJ5 515 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 SLC39A3Q9BRY0 314 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 PRM3Q9NNZ6 103 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 C1GALT1Q9NS00 363 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 NMRK1Q9NWW6 199 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 SOHLH2Q9NX45 425 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 ABCD2Q9UBJ2 740 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 SUCOQ9UBS9 1254 aaKnown RBP14.88□□□□□ -0.03
PCCB-218ENST00000490504 TAC3Q9UHF0 121 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 BCAP29Q9UHQ4 241 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 ICKQ9UPZ9 632 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 RUVBL1Q9Y265 456 aaKnown RBP14.88□□□□□ -0.03
PCCB-218ENST00000490504 TSC22D4Q9Y3Q8 395 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 HEATR5BQ9P2D3 2071 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 CROCCQ5TZA2 2017 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 A0A1W2PPV9 198 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 B8ZZF3 427 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 MYO1DO94832 1006 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 IL6P05231 212 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 CCNYL3P0C7X3 344 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 PLA2G2AP14555 144 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 RPS13P62277 151 aaKnown RBP14.88□□□□□ -0.03
PCCB-218ENST00000490504 ACSM2AQ08AH3 577 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 CDC20Q12834 499 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 SPIN4Q56A73 249 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 TMTC4Q5T4D3 741 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 ACSM2BQ68CK6 577 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 BORAQ6PGQ7 559 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 BPHLQ86WA6 291 aaPredicted RBP14.88□□□□□ -0.03
PCCB-218ENST00000490504 RNF148Q8N7C7 305 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 LINC01555Q8NAE3 123 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 OR2L8Q8NGY9 312 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 ZNF501Q96CX3 271 aaPredicted RBP14.88□□□□□ -0.03
PCCB-218ENST00000490504 ACAT2Q9BWD1 397 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 KLHL25Q9H0H3 589 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 LHX9Q9NQ69 397 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 DMRT3Q9NQL9 472 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 PADI1Q9ULC6 663 aa14.88□□□□□ -0.03
PCCB-218ENST00000490504 GCN1Q92616 2671 aaKnown RBP14.87□□□□□ -0.03
PCCB-218ENST00000490504 ETHE1O95571 254 aa14.87□□□□□ -0.03
PCCB-218ENST00000490504 PVRP15151 417 aa14.87□□□□□ -0.03
PCCB-218ENST00000490504 ST6GAL1P15907 406 aa14.87□□□□□ -0.03
PCCB-218ENST00000490504 TCN2P20062 427 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms