RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 POLQO75417 2590 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 CCDC168Q8NDH2 2452 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 FAM90A27PA6NNH2 459 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 FOXO6A8MYZ6 492 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 HNRNPFP52597 415 aaKnown RBP16.53■□□□□ 0.24
YIPF3-208ENST00000490447 MTTPP55157 894 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 STX4Q12846 297 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 ILF2Q12905 390 aaKnown RBP16.53■□□□□ 0.24
YIPF3-208ENST00000490447 PDIA2Q13087 525 aaKnown RBP16.53■□□□□ 0.24
YIPF3-208ENST00000490447 C18orf21Q32NC0 220 aaPredicted RBP16.53■□□□□ 0.24
YIPF3-208ENST00000490447 HSDL2Q6YN16 418 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 TMEM52Q8NDY8 209 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 CAPZA3Q96KX2 299 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 DEFB127Q9H1M4 99 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 RHOJQ9H4E5 214 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 NT5DC2Q9H857 520 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 LIN28AQ9H9Z2 209 aaKnown RBP16.53■□□□□ 0.24
YIPF3-208ENST00000490447 PLSCR2Q9NRY7 297 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 DNAJC11Q9NVH1 559 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 MYOTQ9UBF9 498 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 CACNA1CQ13936 2221 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 F8P00451 2351 aa16.53■□□□□ 0.24
YIPF3-208ENST00000490447 TGFBR3LH3BV60 316 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 PRKNO60260 465 aaPredicted RBP16.52■□□□□ 0.24
YIPF3-208ENST00000490447 CERS1P27544 350 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 GPR143P51810 404 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 LIM2P55344 173 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 PPIAP62937 165 aaKnown RBP16.52■□□□□ 0.24
YIPF3-208ENST00000490447 EFTUD2Q15029 972 aaKnown RBP eCLIP16.52■□□□□ 0.242e-10■■■■■ 27.4
YIPF3-208ENST00000490447 C16orf47Q6ZP98 133 aaPredicted RBP16.52■□□□□ 0.24
YIPF3-208ENST00000490447 RGS9BPQ6ZS82 235 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 ACAD11Q709F0 780 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 SLC22A16Q86VW1 577 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 MARVELD2Q8N4S9 558 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 SNX31Q8N9S9 440 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 ACBD4Q8NC06 268 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 MORN4Q8NDC4 146 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 OR2M7Q8NG81 312 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 OR5M3Q8NGP4 307 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 OR14A16Q8NHC5 309 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 CSF3RQ99062 836 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 TRIM31Q9BZY9 425 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 DERL2Q9GZP9 239 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 EHD1Q9H4M9 534 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 KCNJ16Q9NPI9 418 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 TXNDC16Q9P2K2 825 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 DAPP1Q9UN19 280 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 RNF6Q9Y252 685 aa16.52■□□□□ 0.24
YIPF3-208ENST00000490447 NKX2-6A6NCS4 301 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 FAM166BA8MTA8 275 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 WWP2O00308 870 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 CTNSO60931 367 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 SEC31AO94979 1220 aaKnown RBP16.51■□□□□ 0.23
YIPF3-208ENST00000490447 OR6B1O95007 311 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 TNNI3P19429 210 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 SOX3P41225 446 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 KCNC1P48547 511 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 POU4F1Q01851 419 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 ADPRMQ3LIE5 342 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 XKR6Q5GH73 641 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 ABHD17CQ6PCB6 329 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 GK5Q6ZS86 529 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 LILRB4Q8NHJ6 448 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 SREK1Q8WXA9 508 aaKnown RBP16.51■□□□□ 0.23
YIPF3-208ENST00000490447 PTCD3Q96EY7 689 aaKnown RBP16.51■□□□□ 0.23
YIPF3-208ENST00000490447 TSPAN17Q96FV3 270 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 QRFPRQ96P65 431 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 KCNC2Q96PR1 638 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 RASL10BQ96S79 203 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 TREX2Q9BQ50 279 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-208ENST00000490447 ALOXE3Q9BYJ1 711 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 ROGDIQ9GZN7 287 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 DEPPQ9NTK1 212 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
YIPF3-208ENST00000490447 MOCS1Q9NZB8 636 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 CLDN16Q9Y5I7 305 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 SPACA6W5XKT8 324 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 GTF3C1Q12789 2109 aa16.51■□□□□ 0.23
YIPF3-208ENST00000490447 NPIPA2E9PIF3 369 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 NPIPA3F8WFD2 350 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 CYR61O00622 381 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 STK16O75716 305 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 PMPCAQ10713 525 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 SERTAD2Q14140 314 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 FASTKD3Q14CZ7 662 aaKnown RBP16.5■□□□□ 0.23
YIPF3-208ENST00000490447 HIST2H2ACQ16777 129 aaPredicted RBP16.5■□□□□ 0.23
YIPF3-208ENST00000490447 PAGE2BQ5JRK9 111 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 NDUFAF5Q5TEU4 345 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 HIST2H2AA3Q6FI13 130 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 SULT1C3Q6IMI6 304 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 RTL4Q6ZR62 310 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 CAPN12Q6ZSI9 719 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 GPSM1Q86YR5 675 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 ZBED8Q8IZ13 594 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 SPATA6LQ8N4H0 392 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 SRFBP1Q8NEF9 429 aaKnown RBP16.5■□□□□ 0.23
YIPF3-208ENST00000490447 CDKL2Q92772 493 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 KIAA1191Q96A73 305 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 TMEM79Q9BSE2 394 aa16.5■□□□□ 0.23
YIPF3-208ENST00000490447 EFCAB11Q9BUY7 163 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms