RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PSMA3P25788 255 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 AOAHP28039 575 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 PCYT1AP49585 367 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 BTG2P78543 158 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 MEF2AQ02078 507 aaPredicted RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 TERF2Q15554 542 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 TMEM249Q2WGJ8 235 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 ICE2Q659A1 982 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 RTL4Q6ZR62 310 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 QSOX2Q6ZRP7 698 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 C22orf34Q6ZV56 151 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 FAM47EQ6ZV65 393 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 PID1Q7Z2X4 250 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 SLC26A11Q86WA9 606 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 VSIG1Q86XK7 387 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 LRRC25Q8N386 305 aaPredicted RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNF441Q8N8Z8 693 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 C9orf106Q8NAJ2 232 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 GOLM1Q8NBJ4 401 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 KCT2Q8NC54 265 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 ZCCHC10Q8TBK6 192 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 ASB15Q8WXK1 588 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 TBC1D20Q96BZ9 403 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 PTCHD1Q96NR3 888 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 TIMP4Q99727 224 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 SHARPINQ9H0F6 387 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 SLCO5A1Q9H2Y9 848 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 EXO5Q9H790 373 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 LIN28AQ9H9Z2 209 aaKnown RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 SH2D2AQ9NP31 389 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNHIT6Q9NWK9 470 aaKnown RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 SPATA7Q9P0W8 599 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 SAE1Q9UBE0 346 aaPredicted RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 TAC3Q9UHF0 121 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 TTC7AQ9ULT0 858 aaPredicted RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 MYO6Q9UM54 1294 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 R3HDM2Q9Y2K5 976 aaKnown RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 NAALAD2Q9Y3Q0 740 aa6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.51□□□□□ -1.37
PDLIM1-203ENST00000490391 KCNE1BA0A087WTH5 132 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 LRRC53A6NM62 1247 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 IQCF5A8MTL0 148 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 A8MUA0 341 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 A8MXE2 369 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 KIF5CO60282 957 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 ERN1O75460 977 aaKnown RBP6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 SRD5A1P18405 259 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 MAOAP21397 527 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 IGFBP5P24593 272 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 IDUAP35475 653 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 ACVR1BP36896 505 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 SLCO1A2P46721 670 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 CPA2P48052 419 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 TRPC1P48995 793 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 GEMP55040 296 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 DYNLT1P63172 113 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 VLDLRP98155 873 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 TAP2Q03519 686 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 FAM27E3Q08E93 113 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 HYAL2Q12891 473 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 DUSP8Q13202 625 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 RNF187Q5TA31 235 aaPredicted RBP6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 PLXDC2Q6UX71 529 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 AFAP1L2Q8N4X5 818 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 RAB42Q8N4Z0 105 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNF611Q8N823 705 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 TFB1MQ8WVM0 346 aaKnown RBP6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 SMPDL3AQ92484 453 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 NCLNQ969V3 563 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 TM4SF19Q96DZ7 209 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 VMP1Q96GC9 406 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 VAT1Q99536 393 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 SFXN3Q9BWM7 321 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 CARD6Q9BX69 1037 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 GBA3Q9H227 469 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 ARNT2Q9HBZ2 717 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 PROK2Q9HC23 129 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 ANKHQ9HCJ1 492 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 NECTIN3Q9NQS3 549 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 SACM1LQ9NTJ5 587 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 QPCTLQ9NXS2 382 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNF226Q9NYT6 803 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 MYOTQ9UBF9 498 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 RSPH14Q9UHP6 348 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 CLDN16Q9Y5I7 305 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 SLC22A7Q9Y694 548 aa6.5□□□□□ -1.37
PDLIM1-203ENST00000490391 CHST10O43529 356 aa6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 B4GALT2O60909 372 aa6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 ZFAND5O76080 213 aa6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 MYO1DO94832 1006 aa6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 IGHV4-39P01824 125 aa6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 APOA4P06727 396 aa6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 TMIGD3P0DMS9 266 aaPredicted RBP6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 ZFXP17010 805 aaPredicted RBP6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 JAK1P23458 1154 aa6.49□□□□□ -1.37
PDLIM1-203ENST00000490391 MSNP26038 577 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms