RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TSC22D4Q9Y3Q8 395 aa9.99□□□□□ -0.81
SCAMP4-208ENST00000489554 CCL27Q9Y4X3 112 aa9.99□□□□□ -0.81
SCAMP4-208ENST00000489554 HS3ST3B1Q9Y662 390 aa9.99□□□□□ -0.81
SCAMP4-208ENST00000489554 PCSK5Q92824 1860 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 SERTM1A2A2V5 107 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 MANBAO00462 879 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 FFAR3O14843 346 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 PCDH17O14917 1159 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 GPR42O15529 346 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 SORBS2O94875 1100 aaKnown RBP9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 UROSP10746 265 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 ACPPP15309 386 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 ITGA3P26006 1051 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 BCL6P41182 706 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 HNF4AP41235 474 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 SCTRP47872 440 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 AVPR1BP47901 424 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 CD97P48960 835 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 CCR8P51685 355 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 HK2P52789 917 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 MLLT10P55197 1068 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 SNRPNP63162 240 aaKnown RBP9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 BTKQ06187 659 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 RAPSNQ13702 412 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 ABRAXAS2Q15018 415 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 ZRSR2Q15696 482 aaKnown RBP9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 IGFBP7Q16270 282 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 CPSF6Q16630 551 aaKnown RBP eCLIP9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 XKR7Q5GH72 579 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 JMJD6Q6NYC1 403 aaPredicted RBP9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 KIRREL2Q6UWL6 708 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 IGFL3Q6UXB1 125 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 SHISA6Q6ZSJ9 500 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 CRLF3Q8IUI8 442 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 TMEM151BQ8IW70 566 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 CAMKVQ8NCB2 501 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 OR7G3Q8NG95 312 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 OR11G2Q8NGC1 345 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 OR2T11Q8NH01 316 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 ATP6V1E2Q96A05 226 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 PNPLA2Q96AD5 504 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 MMABQ96EY8 250 aaPredicted RBP9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 C3orf30Q96M34 536 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 YIPF2Q9BWQ6 316 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 TGIF2Q9GZN2 237 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 AICDAQ9GZX7 198 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 ZNF552Q9H707 407 aaPredicted RBP9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 NT5DC2Q9H857 520 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 C3orf18Q9UK00 162 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 MAP4K5Q9Y4K4 846 aa9.98□□□□□ -0.81
SCAMP4-208ENST00000489554 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 A0A0A6YYC8 382 aaPredicted RBP9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 TRBC2A0A5B9 178 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 FEZF1A0PJY2 475 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 H0YHG0 523 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 H0YIG0 161 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 I3L1I5 382 aaPredicted RBP9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 SDHDO14521 159 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 PIP5K1BO14986 540 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 HDAC3O15379 428 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 P2RX6O15547 441 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 FOXS1O43638 330 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 NSA2O95478 260 aaKnown RBP9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 ETHE1O95571 254 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 HPP00738 406 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 PDYNP01213 254 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 KITP10721 976 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 CXCR2P25025 360 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 NEK2P51955 445 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 EMP2P54851 167 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 HYAL2Q12891 473 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 SLC9B1Q4ZJI4 515 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 VWA2Q5GFL6 755 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 FRG2Q64ET8 278 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 SLC6A19Q695T7 634 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 EPGNQ6UW88 154 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 SCIMPQ6UWF3 145 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 Q6ZSR9 355 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 VN1R4Q7Z5H5 301 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 PRSS58Q8IYP2 241 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 ZADH2Q8N4Q0 377 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 TBC1D19Q8N5T2 526 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 RBMXL3Q8N7X1 1067 aaKnown RBP9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 AMER3Q8N944 861 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 METTL6Q8TCB7 284 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 CPT1CQ8TCG5 803 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 CREB3L4Q8TEY5 395 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 TWIST2Q8WVJ9 160 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 C10orf82Q8WW14 230 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 CCT6BQ92526 530 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 THOC1Q96FV9 657 aaKnown RBP9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 MAELQ96JY0 434 aaKnown RBP9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 LRRC37BQ96QE4 947 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 FRG2BQ96QU4 278 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 HBEGFQ99075 208 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 EBF4Q9BQW3 602 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 RHBGQ9H310 441 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 MEAF6Q9HAF1 191 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms