RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CD79BP40259 229 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 BMPR2Q13873 1038 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 TFDP2Q14188 446 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 FAM120AOSQ5T036 256 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 CYB5R2Q6BCY4 276 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 LDB1Q86U70 411 aaPredicted RBP13.73□□□□□ -0.21
UFD1-209ENST00000489406 FERMT1Q9BQL6 677 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 RHNO1Q9BSD3 238 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 UGT2B28Q9BY64 529 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 HOMER3Q9NSC5 361 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 MED12Q93074 2177 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 MROH6A6NGR9 719 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 ZNF839A8K0R7 811 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 KPNA5O15131 536 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 AVILO75366 819 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 TNNT1P13805 278 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 ALOX12P18054 663 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 PSMA3P25788 255 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 UGT2B10P36537 528 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 SQLEQ14534 574 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
UFD1-209ENST00000489406 ANKRD34AQ69YU3 496 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 PPHLN1Q8NEY8 458 aaKnown RBP13.72□□□□□ -0.21
UFD1-209ENST00000489406 ZFP3Q96NJ6 502 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 PANX3Q96QZ0 392 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 TM9SF2Q99805 663 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 CHODLQ9H9P2 273 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 PROK2Q9HC23 129 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
UFD1-209ENST00000489406 LIPT1Q9Y234 373 aa13.72□□□□□ -0.21
UFD1-209ENST00000489406 FAM234BA2RU67 622 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 HACD1B0YJ81 288 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 PRMT5O14744 637 aaPredicted RBP13.71□□□□□ -0.21
UFD1-209ENST00000489406 MSTNO14793 375 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 RNH1P13489 461 aaKnown RBP13.71□□□□□ -0.21
UFD1-209ENST00000489406 CYP4B1P13584 511 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 HSD17B2P37059 387 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 EIF3BP55884 814 aaKnown RBP13.71□□□□□ -0.21
UFD1-209ENST00000489406 SKP1P63208 163 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 MIDNQ504T8 468 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 BEX5Q5H9J7 111 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 RFLNBQ8N5W9 214 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 ZPLD1Q8TCW7 415 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 AKAP1Q92667 903 aaKnown RBP eCLIP13.71□□□□□ -0.21
UFD1-209ENST00000489406 TUBA1CQ9BQE3 449 aa13.71□□□□□ -0.21
UFD1-209ENST00000489406 GDF2Q9UK05 429 aaPredicted RBP13.71□□□□□ -0.21
UFD1-209ENST00000489406 YLPM1P49750 1951 aaKnown RBP13.71□□□□□ -0.22
UFD1-209ENST00000489406 NINQ8N4C6 2090 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 A0A087X0T9 212 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 LRRC14BA6NHZ5 514 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 H7C0C1 242 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 KLF4O43474 513 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 CEP104O60308 925 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 TNFSF13O75888 250 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 LRATO95237 230 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 C1QAP02745 245 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 SOD3P08294 240 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 FAM228BP0C875 321 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 ZNF888P0CJ79 500 aaPredicted RBP13.7□□□□□ -0.22
UFD1-209ENST00000489406 POU2F1P14859 743 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 CREB1P16220 341 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 HRH2P25021 359 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 PPARGP37231 505 aaPredicted RBP13.7□□□□□ -0.22
UFD1-209ENST00000489406 CDKN2BP42772 138 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 ATP5OP48047 213 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 GAB1Q13480 694 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 FASTKD1Q53R41 847 aaKnown RBP13.7□□□□□ -0.22
UFD1-209ENST00000489406 ZNF474Q6S9Z5 364 aaPredicted RBP13.7□□□□□ -0.22
UFD1-209ENST00000489406 AFTPHQ6ULP2 937 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 ZNF534Q76KX8 674 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 LRRC56Q8IYG6 542 aaPredicted RBP13.7□□□□□ -0.22
UFD1-209ENST00000489406 ZNF321PQ8N8H1 164 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 OR13J1Q8NGT2 312 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 OR4L1Q8NH43 312 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 PAQR8Q8TEZ7 354 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 LRRC45Q96CN5 670 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 MRFAP1L1Q96HT8 127 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 HS6ST2Q96MM7 605 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 FAM114A2Q9NRY5 505 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 UVRAGQ9P2Y5 699 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 SLC2A6Q9UGQ3 507 aa13.7□□□□□ -0.22
UFD1-209ENST00000489406 SLC35F4A4IF30 521 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 C16orf97H3BN30 126 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 TGFBR3LH3BV60 316 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 GFYI3L273 518 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 NDUFS4O43181 175 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 SSX4O60224 188 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 PSIP1O75475 530 aaKnown RBP13.69□□□□□ -0.22
UFD1-209ENST00000489406 SYF2O95926 243 aaKnown RBP13.69□□□□□ -0.22
UFD1-209ENST00000489406 SERPIND1P05546 499 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 DPP4P27487 766 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 PCYT1AP49585 367 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 RNF4P78317 190 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 PHKG1Q16816 387 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
UFD1-209ENST00000489406 ALKBH5Q6P6C2 394 aaKnown RBP13.69□□□□□ -0.22
UFD1-209ENST00000489406 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
UFD1-209ENST00000489406 UCN3Q969E3 161 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms