RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LRRC2Q9BYS8 371 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 SPRTNQ9H040 489 aaPredicted RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 AUNIPQ9H7T9 357 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 NOX4Q9NPH5 578 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF701Q9NV72 531 aaPredicted RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 KLHL28Q9NXS3 571 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 KLHL9Q9P2J3 617 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 B3GAT1Q9P2W7 334 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 P2RX2Q9UBL9 471 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TINAGQ9UJW2 476 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ADAM21Q9UKJ8 722 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 OR10H1Q9Y4A9 318 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 PRAG1Q86YV5 1406 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 TRAV18A0A075B6X5 111 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 HYKKA2RU49 373 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 OR2AG2A6NM03 316 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 LINC00473A8K010 186 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 GABRR3A8MPY1 467 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 MEI4A8MW99 385 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 C17orf105B2RV13 164 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 HSBP1L1C9JCN9 74 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 E9PMD0 336 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 GOLGA8SH3BPF8 625 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SGK494L7N484 410 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 RHODO00212 210 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 INPPL1O15357 1258 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 NVLO15381 856 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 YKT6O15498 198 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 AKR7A2O43488 359 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SNX3O60493 162 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 UGDHO60701 494 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 WBP4O75554 376 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 UPK3AO75631 287 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 NEBLO76041 1014 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CPNE6O95741 557 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 BAG3O95817 575 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 TTLL1O95922 423 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 LGI1O95970 557 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CSTAP01040 98 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 LDLRP01130 860 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 APRTP07741 180 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CT45A8P0DMV1 189 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CT45A9P0DMV2 189 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PNMTP11086 282 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CETPP11597 493 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ODC1P11926 461 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 GP9P14770 177 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 WT1P19544 449 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 UQCRC2P22695 453 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SRD5A2P31213 254 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ATP5C1P36542 298 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 LONP1P36776 959 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PIGAP37287 484 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SYKP43405 635 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 NKX2-1P43699 371 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 FNTAP49354 379 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CRYBB1P53674 252 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 MAZP56270 477 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CTAG1AP78358 180 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 HOXA4Q00056 320 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 DRP2Q13474 957 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 KEAP1Q14145 624 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 MTHFSDQ2M296 383 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CT45A2Q5DJT8 189 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CMPK2Q5EBM0 449 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 C11orf63Q6NUN7 778 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SYT10Q6XYQ8 523 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 KIF6Q6ZMV9 814 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 Q6ZPB1 254 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF788Q6ZQV5 615 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CENPQQ7L2Z9 268 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CPEB2Q7Z5Q1 589 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SLC22A16Q86VW1 577 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PAQR7Q86WK9 346 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 UBQLNLQ8IYU4 475 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CSGALNACT2Q8N6G5 542 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 C1orf52Q8N6N3 182 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 LINC00469Q8N7U9 141 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM99Q8N816 258 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 COLGALT1Q8NBJ5 622 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 NPEPL1Q8NDH3 523 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF548Q8NEK5 533 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ACVR1CQ8NER5 493 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 TRPV3Q8NET8 790 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 GPRC5AQ8NFJ5 357 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 BBS1Q8NFJ9 593 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 BPIFCQ8NFQ6 507 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 OR2AK2Q8NG84 335 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 RAET1EQ8TD07 263 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 IGFBPL1Q8WX77 278 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PIGCQ92535 297 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PHYHIPQ92561 330 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM45BQ96B21 275 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PINX1Q96BK5 328 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ZBTB9Q96C00 473 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 REPS1Q96D71 796 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 MRPL53Q96EL3 112 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 HMCESQ96FZ2 354 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM19Q96HH6 336 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms