RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DDX39BQ13838 428 aaKnown RBP14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 AP5B1Q2VPB7 878 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 UNC50Q53HI1 259 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 OR4C11Q6IEV9 310 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF595Q8IYB9 648 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 CNPY4Q8N129 248 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 CISD2Q8N5K1 135 aaKnown RBP14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 FAM47BQ8NA70 645 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 ELP5Q8TE02 316 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 ADAMTS18Q8TE60 1221 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 RNF32Q9H0A6 362 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 CLMPQ9H6B4 373 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 PPCSQ9HAB8 311 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 SEMA4BQ9NPR2 832 aaPredicted RBP14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 PRTFDC1Q9NRG1 225 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 STMN3Q9NZ72 180 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF225Q9UK10 706 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 EMCNQ9ULC0 261 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 PPT2Q9UMR5 302 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 NUP210LQ5VU65 1888 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 A8MUI8 341 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 ESPNB1AK53 854 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 CLDN4O14493 209 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 PLPP1O14494 284 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 MAN1A2O60476 641 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 CTNSO60931 367 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 GSTA1P08263 222 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 TSPAN8P19075 237 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 PTX3P26022 381 aaPredicted RBP14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 PPP2R1BP30154 601 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 BSGP35613 385 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 TNFSF10P50591 281 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 ARFIP1P53367 373 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 HERVK_113P63132 956 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 CUL3Q13618 768 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF169Q14929 603 aaPredicted RBP14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 TLR1Q15399 786 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 GGTA1PQ4G0N0 100 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 ACER2Q5QJU3 275 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 LETMD1Q6P1Q0 360 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 IQCKQ8N0W5 287 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 KIF2BQ8N4N8 673 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 ATP6V1E2Q96A05 226 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 RGMAQ96B86 450 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 REPS1Q96D71 796 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 ERVK-6Q9BXR3 956 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 ILKAPQ9H0C8 392 aaPredicted RBP14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 COPS7BQ9H9Q2 264 aaPredicted RBP14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 KCNK13Q9HB14 408 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 PPIEQ9UNP9 301 aaKnown RBP14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 NTNG1Q9Y2I2 539 aa14.93□□□□□ -0.02
CTDSP1-209ENST00000488627 SAGE2PA6NJ88 616 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 A8MUA0 341 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 SLU7O95391 586 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 SSR2P43308 183 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 TSFMP43897 325 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 GPR143P51810 404 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 PRKAA2P54646 552 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 ARG2P78540 354 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 SLAMF1Q13291 335 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF678Q5SXM1 525 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 ABHD17BQ5VST6 288 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 FAM219BQ5XKK7 198 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 FRG2Q64ET8 278 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 FCRLBQ6BAA4 426 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 MRM1Q6IN84 353 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 WDR93Q6P2C0 686 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 MILR1Q7Z6M3 343 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 CRLF3Q8IUI8 442 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 ZCCHC7Q8N3Z6 543 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 GALNT11Q8NCW6 608 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 ARMC2Q8NEN0 867 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 OR4F6Q8NGB9 312 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 EPS8L3Q8TE67 593 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 AENQ8WTP8 325 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 MTFMTQ96DP5 389 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 CNDP1Q96KN2 507 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 TMEM237Q96Q45 408 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 FRG2BQ96QU4 278 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 DDX31Q9H8H2 851 aaKnown RBP14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 ASF1BQ9NVP2 202 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 DCDC2Q9UHG0 476 aa14.92□□□□□ -0.02
CTDSP1-209ENST00000488627 A0A0A6YYD5 115 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 DYTNA2CJ06 578 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 G3V2L1 256 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 EEDO75530 441 aaKnown RBP14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 OTCP00480 354 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 F10P00742 488 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 TAC1P20366 129 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 IMPDH1P20839 514 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 ATP5F1P24539 256 aaPredicted RBP14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 CLCQ05315 142 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 SLC13A2Q13183 592 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 RCN2Q14257 317 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 TERF2Q15554 542 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 CLNKQ7Z7G1 428 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 ARMC10Q8N2F6 343 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 EFCAB3Q8N7B9 438 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 APCDD1LQ8NCL9 501 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms