RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PKP2Q99959 881 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 VGLL1Q99990 258 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 CCM2Q9BSQ5 444 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 MCRIP2Q9BUT9 160 aaKnown RBP2.7□□□□□ -1.98
CD46-215ENST00000488596 NTMT1Q9BV86 223 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 PNPLA3Q9NST1 481 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 DNAJC11Q9NVH1 559 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 THAP10Q9P2Z0 257 aaPredicted RBP2.7□□□□□ -1.98
CD46-215ENST00000488596 MRPS18CQ9Y3D5 142 aaKnown RBP2.7□□□□□ -1.98
CD46-215ENST00000488596 OR1A2Q9Y585 309 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 ZHX2Q9Y6X8 837 aa2.7□□□□□ -1.98
CD46-215ENST00000488596 ABCC9O60706 1549 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 IGHV3-20A0A0C4DH32 117 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 ATP6AP2A0A1C7CYW4 349 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 FAM149AA5PLN7 773 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 RNF103O00237 685 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 SOCS3O14543 225 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 TFECO14948 347 aaPredicted RBP2.69□□□□□ -1.98
CD46-215ENST00000488596 CHUKO15111 745 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 KERAO60938 352 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 NXPH4O95158 308 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 ANGPTL1O95841 491 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 GAS8O95995 478 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 EPOP01588 193 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 LYNP07948 512 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 AZU1P20160 251 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 OR1D2P34982 312 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 CASP3P42574 277 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 TEFQ10587 303 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 ENPP2Q13822 863 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 GIT2Q14161 759 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 HFEQ30201 348 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 SLC10A5Q5PT55 438 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 PLPP4Q5VZY2 271 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 SNRNP48Q6IEG0 339 aaKnown RBP2.69□□□□□ -1.98
CD46-215ENST00000488596 ZNF613Q6PF04 617 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 TRIM65Q6PJ69 517 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 C3P1Q6ZMU1 363 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 CACUL1Q86Y37 369 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 CNTN4Q8IWV2 1026 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 ELMOD1Q8N336 334 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 SPC24Q8NBT2 197 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 OR10G7Q8NGN6 311 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 HAS2Q92819 552 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 DDX50Q9BQ39 737 aaKnown RBP2.69□□□□□ -1.98
CD46-215ENST00000488596 PYGO2Q9BRQ0 406 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 CABLES2Q9BTV7 478 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 MRPL9Q9BYD2 267 aaKnown RBP2.69□□□□□ -1.98
CD46-215ENST00000488596 NAPBQ9H115 298 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 MAGEF1Q9HAY2 307 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 KCNK13Q9HB14 408 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 PLEKHA3Q9HB20 300 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 MID1IP1Q9NPA3 183 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 NDE1Q9NXR1 346 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 PLEK2Q9NYT0 353 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 ZNF319Q9P2F9 582 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 EXOC6BQ9Y2D4 811 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 SNX5Q9Y5X3 404 aa2.69□□□□□ -1.98
CD46-215ENST00000488596 IGHV3-38A0A0C4DH36 116 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 TMEM129A0AVI4 362 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 TRIM64A6NGJ6 449 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 TRIM64BA6NI03 449 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 SLC15A5A6NIM6 579 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 INPP4BO15327 924 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ZNF749O43361 778 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 TNFSF12O43508 249 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 DCXO43602 365 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 SNAP91O60641 907 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 MTRF1O75570 445 aaKnown RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 STBD1O95210 358 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 CPNE6O95741 557 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 THEGLP0DJG4 465 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 P4HA1P13674 534 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 CD1DP15813 335 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ID1P41134 155 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 NDST2P52849 883 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ERVK-16P61578 105 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 CD300CQ08708 224 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 AP1B1Q10567 949 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 NPRL3Q12980 569 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 LCP2Q13094 533 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 RPA4Q13156 261 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 PDE7AQ13946 482 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 LY6DQ14210 128 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 GK2Q14410 553 aaPredicted RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 LASP1Q14847 261 aaKnown RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 C2CD6Q53TS8 623 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 CAPN13Q6MZZ7 669 aaPredicted RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 ALKBH5Q6P6C2 394 aaKnown RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 RAPH1Q70E73 1250 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 NLRP14Q86W24 1093 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 KCNMB4Q86W47 210 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ZFAND4Q86XD8 727 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ZNF444Q8N0Y2 327 aaPredicted RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 FBXW8Q8N3Y1 598 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 CCDC197Q8NCU1 140 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 PRSS33Q8NF86 280 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 MGARPQ8TDB4 240 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms