RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 C5orf66Q9H5L9 145 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 UBE2TQ9NPD8 197 aaPredicted RBP2.68□□□□□ -1.98
CCDC66-221ENST00000487739 TMOD3Q9NYL9 352 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 SYNDIG1LA6NDD5 238 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 PRSS46E5RG02 174 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 LRRTM2O43300 516 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 DIAPH2O60879 1101 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 HOXC4P09017 264 aaPredicted RBP2.67□□□□□ -1.98
CCDC66-221ENST00000487739 SPP1P10451 314 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 ODC1P11926 461 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 SKILP12757 684 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 ZNF32P17041 273 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 BACE1P56817 501 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 RIPK4P57078 832 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 ERVPABLB-1P60509 514 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 NUCB1Q02818 461 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 RASA2Q15283 850 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 TAZQ16635 292 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 GSG1Q2KHT4 349 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 SLC27A4Q6P1M0 643 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 RFPL4BQ6ZWI9 263 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 ZNF781Q8N8C0 355 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 LSMEM1Q8N8F7 131 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 CCDC89Q8N998 374 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 KCTD6Q8NC69 237 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 CD99L2Q8TCZ2 262 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 U2AF1L4Q8WU68 220 aaKnown RBP2.67□□□□□ -1.98
CCDC66-221ENST00000487739 PAXXQ9BUH6 204 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 TRIM7Q9C029 511 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 UBQLN3Q9H347 655 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 NKIRAS2Q9NYR9 191 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 FBXO7Q9Y3I1 522 aa2.67□□□□□ -1.98
CCDC66-221ENST00000487739 TMCO5BA8MYB1 307 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 IGKV3-11P04433 115 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 FYNP06241 537 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 PPP5CP53041 499 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 AIMP1Q12904 312 aaKnown RBP2.66□□□□□ -1.98
CCDC66-221ENST00000487739 PRPF4BQ13523 1007 aaKnown RBP2.66□□□□□ -1.98
CCDC66-221ENST00000487739 KCTD2Q14681 263 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 ABRAXAS2Q15018 415 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 KRT80Q6KB66 452 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 NEPROQ6NW34 567 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 ZNF530Q6P9A1 599 aaPredicted RBP2.66□□□□□ -1.98
CCDC66-221ENST00000487739 BTNL8Q6UX41 500 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 OR8H2Q8N162 312 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 SLC43A2Q8N370 569 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 ZNRF1Q8ND25 227 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 SMPDL3AQ92484 453 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 PGAP3Q96FM1 320 aaPredicted RBP2.66□□□□□ -1.98
CCDC66-221ENST00000487739 RBM18Q96H35 190 aaKnown RBP2.66□□□□□ -1.98
CCDC66-221ENST00000487739 KATNB1Q9BVA0 655 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 CLIC5Q9NZA1 410 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 BCCIPQ9P287 314 aaKnown RBP eCLIP2.66□□□□□ -1.98
CCDC66-221ENST00000487739 WDR35Q9P2L0 1181 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 KLK4Q9Y5K2 254 aa2.66□□□□□ -1.98
CCDC66-221ENST00000487739 C2orf92A0A1B0GVN3 265 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 URADA6NGE7 173 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 ZNF732B4DXR9 585 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 TSC22D2O75157 780 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 MOCS2O96007 188 aaPredicted RBP2.65□□□□□ -1.99
CCDC66-221ENST00000487739 TCF4P15884 667 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 ERCC2P18074 760 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 MDH2P40926 338 aaKnown RBP2.65□□□□□ -1.99
CCDC66-221ENST00000487739 ALDH3B1P43353 468 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 TNFRSF4P43489 277 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 FNTAP49354 379 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 UGCGQ16739 394 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 LBHQ53QV2 105 aaPredicted RBP2.65□□□□□ -1.99
CCDC66-221ENST00000487739 WSCD1Q658N2 575 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 RPUSD3Q6P087 351 aaKnown RBP2.65□□□□□ -1.99
CCDC66-221ENST00000487739 C17orf107Q6ZR85 190 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 FAM219AQ8IW50 185 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 SLC22A18ASQ8N1D0 253 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 ELMOD1Q8N336 334 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 CLEC1AQ8NC01 280 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 NCOA7Q8NI08 942 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 LINC01006Q8NI28 216 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 ZNF799Q96GE5 643 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 TSSK2Q96PF2 358 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 TTLL3Q9Y4R7 772 aa2.65□□□□□ -1.99
CCDC66-221ENST00000487739 UBE2CO00762 179 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 FLRT2O43155 660 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 LYPD3O95274 346 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 OR9G9P0C7N8 305 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 KRT3P12035 628 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 PPP2R1AP30153 589 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 UCNP55089 124 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 CALD1Q05682 793 aaKnown RBP2.64□□□□□ -1.99
CCDC66-221ENST00000487739 C17orf58Q2M2W7 97 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 C9orf129Q5T035 196 aaKnown RBP2.64□□□□□ -1.99
CCDC66-221ENST00000487739 FAM46CQ5VWP2 391 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 PLPP4Q5VZY2 271 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 KLHL10Q6JEL2 608 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 PPP1R21Q6ZMI0 780 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 C11orf57Q6ZUT1 292 aaPredicted RBP2.64□□□□□ -1.99
CCDC66-221ENST00000487739 UBQLNLQ8IYU4 475 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 SLC25A23Q9BV35 468 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 TXLNGYQ9BZA5 131 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 ANKRD2Q9GZV1 360 aa2.64□□□□□ -1.99
CCDC66-221ENST00000487739 MYOZ2Q9NPC6 264 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms