RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 PAPOLGQ9BWT3 736 aaKnown RBP3.28□□□□□ -1.88
LINC00888-204ENST00000487386 PUS3Q9BZE2 481 aaKnown RBP3.28□□□□□ -1.88
LINC00888-204ENST00000487386 UBQLN3Q9H347 655 aa3.28□□□□□ -1.88
LINC00888-204ENST00000487386 PRR34Q9NV39 138 aa3.28□□□□□ -1.88
LINC00888-204ENST00000487386 GTSE1Q9NYZ3 720 aa3.28□□□□□ -1.88
LINC00888-204ENST00000487386 GIMAP2Q9UG22 337 aa3.28□□□□□ -1.88
LINC00888-204ENST00000487386 PILRAQ9UKJ1 303 aa3.28□□□□□ -1.88
LINC00888-204ENST00000487386 TSPAN16Q9UKR8 245 aa3.28□□□□□ -1.88
LINC00888-204ENST00000487386 COLEC10Q9Y6Z7 277 aa3.28□□□□□ -1.88
LINC00888-204ENST00000487386 KAT6BQ8WYB5 2073 aa3.28□□□□□ -1.89
LINC00888-204ENST00000487386 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 LRPPRCP42704 1394 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 RPGRIP1LQ68CZ1 1315 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 CENPJQ9HC77 1338 aaPredicted RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 HTR3EA5X5Y0 456 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 PPIP5K2O43314 1243 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 LRCH4O75427 683 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 SIX3O95343 332 aaPredicted RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 MOCS2O96007 188 aaPredicted RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 RPLP0P05388 317 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 FAM58BPP0C7Q3 252 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 KRT3P12035 628 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 LBPP18428 481 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 OXTRP30559 389 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 PKLRP30613 574 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 SSTR1P30872 391 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 ZFP36L2P47974 494 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 ABCE1P61221 599 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 ZFP36L1Q07352 338 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 FCHO2Q0JRZ9 810 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 IDI1Q13907 227 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 GRB14Q14449 540 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 SHEQ5VZ18 495 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 ZNF770Q6IQ21 691 aaPredicted RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 KLHL10Q6JEL2 608 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 ZNF841Q6ZN19 808 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 MARCH9Q86YJ5 346 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 ZC3H3Q8IXZ2 948 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 DND1Q8IYX4 353 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 SLC39A11Q8N1S5 342 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 CCDC185Q8N715 623 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 OR9Q2Q8NGE9 314 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 OR5M9Q8NGP3 310 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 GRK7Q8WTQ7 553 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 ST6GALNAC6Q969X2 333 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 SIPA1Q96FS4 1042 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 AK8Q96MA6 479 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 C1orf147Q96MC9 270 aaPredicted RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 INPP5KQ9BT40 448 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 C5orf66Q9H5L9 145 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 IL1RAPQ9NPH3 570 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 PFDN4Q9NQP4 134 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 KLK11Q9UBX7 282 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 RUVBL2Q9Y230 463 aaKnown RBP3.27□□□□□ -1.89
LINC00888-204ENST00000487386 NSD3Q9BZ95 1437 aa3.27□□□□□ -1.89
LINC00888-204ENST00000487386 CHD2O14647 1828 aaKnown RBP3.26□□□□□ -1.89
LINC00888-204ENST00000487386 STRCP1A6NGW2 1772 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 LRRC7Q96NW7 1537 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 ARHGEF33A8MVX0 844 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 SHISA9B4DS77 424 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 LMO7DNF2Z398 122 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 MLNRO43193 412 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 TNFSF12O43508 249 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 ANKRD34CP0C6C1 535 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 GIFP27352 417 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 PIK3R1P27986 724 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 FEN1P39748 380 aaKnown RBP3.26□□□□□ -1.89
LINC00888-204ENST00000487386 OR3A3P47888 321 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 BTG1P62324 171 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 HIGD2BQ4VC39 106 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 ZNF542PQ5EBM4 170 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 TRAT1Q6PIZ9 186 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 MACC1Q6ZN28 852 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 TRMT11Q7Z4G4 463 aaKnown RBP3.26□□□□□ -1.89
LINC00888-204ENST00000487386 CARM1Q86X55 608 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 SPPL2AQ8TCT8 520 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 CD99L2Q8TCZ2 262 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 TOMM40LQ969M1 308 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 TSSK2Q96PF2 358 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 CCDC28BQ9BUN5 200 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 ANAPC5Q9UJX4 755 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 RARRES3Q9UL19 164 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 SATB2Q9UPW6 733 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 ABCA3Q99758 1704 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 PIK3C2AO00443 1686 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 SHPRHQ149N8 1683 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 USP54Q70EL1 1684 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 FAM135BQ49AJ0 1406 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 PTPRUQ92729 1446 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 ADGRL3Q9HAR2 1447 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 AGRNO00468 2067 aa3.26□□□□□ -1.89
LINC00888-204ENST00000487386 PHRF1Q9P1Y6 1649 aaKnown RBP3.26□□□□□ -1.89
LINC00888-204ENST00000487386 METP08581 1390 aa3.25□□□□□ -1.89
LINC00888-204ENST00000487386 KTN1Q86UP2 1357 aaKnown RBP3.25□□□□□ -1.89
LINC00888-204ENST00000487386 PLEKHH1Q9ULM0 1364 aa3.25□□□□□ -1.89
LINC00888-204ENST00000487386 NINLQ9Y2I6 1382 aa3.25□□□□□ -1.89
LINC00888-204ENST00000487386 STRCQ7RTU9 1775 aa3.25□□□□□ -1.89
LINC00888-204ENST00000487386 ADAMTS9Q9P2N4 1935 aa3.25□□□□□ -1.89
LINC00888-204ENST00000487386 MED14O60244 1454 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms