RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 C5orf30Q96GV9 206 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 EPSTI1Q96J88 318 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 ATP6V0BQ99437 205 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 PITPNM3Q9BZ71 974 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 P2RY12Q9H244 342 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 PANK4Q9NVE7 773 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 DNAJC11Q9NVH1 559 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 INTS10Q9NVR2 710 aaKnown RBP4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 FBXL4Q9UKA2 621 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 TCF19Q9Y242 345 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 ITGB4P16144 1822 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 SBF1O95248 1867 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 C4BP0C0L5 1744 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 CACNB4O00305 520 aaPredicted RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 AMBPP02760 352 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 VTNP04004 478 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 RAF1P04049 648 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 PRKAR1AP10644 381 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 P4HA1P13674 534 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 CEACAM1P13688 526 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 RPL35AP18077 110 aaKnown RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 CDKN1AP38936 164 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 OR3A3P47888 321 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 UCP2P55851 309 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 OR1D5P58170 312 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 RPP38P78345 283 aaKnown RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 HNRNPA0Q13151 305 aaKnown RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 SGCGQ13326 291 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 TMEM132DQ14C87 1099 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 ARMCX4Q5H9R4 360 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 PSRC1Q6PGN9 363 aaPredicted RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 PRSS42Q7Z5A4 293 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 PTAR1Q7Z6K3 402 aaPredicted RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 ZC3H3Q8IXZ2 948 aaKnown RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 TCEANCQ8N8B7 351 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 CLEC1AQ8NC01 280 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 PSMA8Q8TAA3 256 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 ARHGAP45Q92619 1136 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM46BQ96A09 425 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF501Q96CX3 271 aaPredicted RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 F2RL3Q96RI0 385 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 NKX3-1Q99801 234 aaPredicted RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 DPEP2Q9H4A9 486 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 WWOXQ9NZC7 414 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 HACD3Q9P035 362 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 AKAP7Q9P0M2 348 aaPredicted RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 ELF5Q9UKW6 265 aaPredicted RBP4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF510Q9Y2H8 683 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 TMED7Q9Y3B3 224 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 CCDC88AQ3V6T2 1871 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 CCDC7Q96M83 1385 aa4.36□□□□□ -1.71
PRPF38A-203ENST00000487160 A8MVM7 634 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 HHLA1C9JL84 531 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 M0R296 226 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF195O14628 629 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 MLNRO43193 412 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 VEGFDO43915 354 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 KHDRBS3O75525 346 aaKnown RBP4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 LETM1O95202 739 aaPredicted RBP4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 MT-ND2P03891 347 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 THEGLP0DJG4 465 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 KRT3P12035 628 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 GNB3P16520 340 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 ANOS1P23352 680 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 LEPRP48357 1165 aaKnown RBP4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 NR0B1P51843 470 aaKnown RBP4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 SMSP52788 366 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 DCDC1P59894 354 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 CSNK2BP67870 215 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 ARF5P84085 180 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 MAPK11Q15759 364 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 ACKR1Q16570 336 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 DUSP5Q16690 384 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 TMEM126BQ8IUX1 230 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 LAX1Q8IWV1 398 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 DCLK2Q8N568 766 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 OR5AP2Q8NGF4 316 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 OR10G8Q8NGN5 311 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 AZIN2Q96A70 460 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 FSD1Q9BTV5 496 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 NYXQ9GZU5 481 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 THAP9Q9H5L6 903 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 RNF186Q9NXI6 227 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 POMT2Q9UKY4 750 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 TIAM2Q8IVF5 1701 aa4.35□□□□□ -1.71
PRPF38A-203ENST00000487160 A0A087WW49 117 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM149AA5PLN7 773 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 CYTIPO60759 359 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 SAP30O75446 220 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 GRAP2O75791 330 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 SOX3P41225 446 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 OR3A2P47893 321 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 YBEYP58557 167 aaPredicted RBP4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 GNB1P62873 340 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 TRA2AQ13595 282 aaKnown RBP eCLIP4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 CDH18Q13634 790 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 PPA1Q15181 289 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF876PQ49A33 203 aa4.34□□□□□ -1.71
PRPF38A-203ENST00000487160 FGD3Q5JSP0 725 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms