RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 CCDC89Q8N998 374 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 OR56A3Q8NH54 315 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 ALKBH8Q96BT7 664 aaKnown RBP13.78□□□□□ -0.2
PFDN4-204ENST00000487129 SARAFQ96BY9 339 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 RHBGQ9H310 441 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 PNO1Q9NRX1 252 aaKnown RBP13.78□□□□□ -0.2
PFDN4-204ENST00000487129 TUBA8Q9NY65 449 aaPredicted RBP13.78□□□□□ -0.2
PFDN4-204ENST00000487129 GUCA1BQ9UMX6 200 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 ZCWPW2A0A1B0GU75 182 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 FAM47E-STBD1D6RA91 191 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 AP3B1O00203 1094 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 HCN1O60741 890 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 SERPIND1P05546 499 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 EPXP11678 715 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 GABRA1P14867 456 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 BMP5P22003 454 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 CEACAM8P31997 349 aaPredicted RBP13.77□□□□□ -0.21
PFDN4-204ENST00000487129 AHRP35869 848 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 HNF4AP41235 474 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 SLC1A2P43004 574 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 WNT3P56703 355 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 NKX6-1P78426 367 aaPredicted RBP13.77□□□□□ -0.21
PFDN4-204ENST00000487129 RGS1Q08116 209 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 DHX9Q08211 1270 aaKnown RBP13.77□□□□□ -0.21
PFDN4-204ENST00000487129 RUNX2Q13950 521 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 RTL4Q6ZR62 310 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 ZNF321PQ8N8H1 164 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 GOLM1Q8NBJ4 401 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 ARMC2Q8NEN0 867 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 EEF1AKMT1Q8WVE0 214 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 SREK1Q8WXA9 508 aaKnown RBP13.77□□□□□ -0.21
PFDN4-204ENST00000487129 NEIL2Q969S2 332 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 SNF8Q96H20 258 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 PARVBQ9HBI1 364 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 NEUROD4Q9HD90 331 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 SH2D2AQ9NP31 389 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 BEX4Q9NWD9 120 aaPredicted RBP13.77□□□□□ -0.21
PFDN4-204ENST00000487129 ATG4BQ9Y4P1 393 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 PCDHGB3Q9Y5G1 929 aa13.77□□□□□ -0.21
PFDN4-204ENST00000487129 TRGV5A0A0B4J1U4 118 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 HSPB2A8KAH6 182 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 PSMD12O00232 456 aaPredicted RBP13.76□□□□□ -0.21
PFDN4-204ENST00000487129 C8GP07360 202 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 RFPL3SP0C7P2 107 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 TPSB2P20231 275 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 PCSK6P29122 969 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 REEP5Q00765 189 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 SP140Q13342 867 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 SLC10A1Q14973 349 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 PCBP2Q15366 365 aaKnown RBP eCLIP13.76□□□□□ -0.21
PFDN4-204ENST00000487129 TPSAB1Q15661 275 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 HSPB2Q16082 182 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 HECTD2Q5U5R9 776 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 SHEQ5VZ18 495 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 TNIP2Q8NFZ5 429 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 CCDC77Q9BR77 488 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 ZNF703Q9H7S9 590 aaPredicted RBP13.76□□□□□ -0.21
PFDN4-204ENST00000487129 ZNF395Q9H8N7 513 aaPredicted RBP13.76□□□□□ -0.21
PFDN4-204ENST00000487129 ADAP2Q9NPF8 381 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 ALKBH4Q9NXW9 302 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 HIVEP2P31629 2446 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 NCKAP5O14513 1909 aa13.76□□□□□ -0.21
PFDN4-204ENST00000487129 LRRC3CA6NJW4 275 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 FAM171A2A8MVW0 826 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 HRGP04196 525 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 PIGAP37287 484 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 ZNF136P52737 540 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 HSD17B7P56937 341 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 CDK16Q00536 496 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 DHX34Q14147 1143 aaKnown RBP13.75□□□□□ -0.21
PFDN4-204ENST00000487129 ACSF3Q4G176 576 aaPredicted RBP13.75□□□□□ -0.21
PFDN4-204ENST00000487129 SEL1L2Q5TEA6 688 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 ARMC3Q5W041 872 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 UGT3A1Q6NUS8 523 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 FAM47EQ6ZV65 393 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 CAND1Q86VP6 1230 aaKnown RBP13.75□□□□□ -0.21
PFDN4-204ENST00000487129 LRRC8AQ8IWT6 810 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 AGGF1Q8N302 714 aaeCLIP13.75□□□□□ -0.214e-8■□□□□ 9.4
PFDN4-204ENST00000487129 LINC01560Q8TB33 94 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 PTPMT1Q8WUK0 201 aaPredicted RBP13.75□□□□□ -0.21
PFDN4-204ENST00000487129 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 CAPZA3Q96KX2 299 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 SGCZQ96LD1 299 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 PROK2Q9HC23 129 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
PFDN4-204ENST00000487129 CTAGE9A4FU28 777 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 TUBAL3A6NHL2 446 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 CLCA1A8K7I4 914 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 H7C1Q1 480 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 DVL2O14641 736 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 HAUS5O94927 633 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 SERPINA6P08185 405 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 CCDC175P0C221 793 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 PAMP19021 973 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 ELAVL1Q15717 326 aaKnown RBP13.74□□□□□ -0.21
PFDN4-204ENST00000487129 DUPD1Q68J44 220 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 DRICH1Q6PGQ1 229 aaPredicted RBP13.74□□□□□ -0.21
PFDN4-204ENST00000487129 HSDL2Q6YN16 418 aa13.74□□□□□ -0.21
PFDN4-204ENST00000487129 LRRC25Q8N386 305 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms