RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 OR52P1PQ8NH57 321 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 KCTD7Q96MP8 289 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 RPRD1AQ96P16 312 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PKMYT1Q99640 499 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 WACQ9BTA9 647 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PPA2Q9H2U2 334 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PIGUQ9H490 435 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ELOVL6Q9H5J4 265 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PCDHGC4Q9Y5F7 938 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 TLR4O00206 839 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 QSOX1O00391 747 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 IGFBP1P08833 259 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 RRASP10301 218 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 LAMP1P11279 417 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PRPS1L1P21108 318 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 CFL1P23528 166 aaKnown RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 MAPK1P28482 360 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PPP3R1P63098 170 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 SRSF11Q05519 484 aaKnown RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 RPA4Q13156 261 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 BTN1A1Q13410 526 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 VGLL4Q14135 290 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 COL28A1Q2UY09 1125 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 LEXMQ3ZCV2 418 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 MEDAGQ5VYS4 303 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ALG1LQ6GMV1 187 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 LIPIQ6XZB0 460 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 HDDC2Q7Z4H3 204 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ADGRG3Q86Y34 549 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 SYT12Q8IV01 421 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 DENND1CQ8IV53 801 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 OR11H7Q8NGC8 314 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 KLHL15Q96M94 604 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 SLC6A18Q96N87 628 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PSKH2Q96QS6 385 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 TCF25Q9BQ70 676 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 MGME1Q9BQP7 344 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 KATNAL1Q9BW62 490 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 BOCQ9BWV1 1114 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 RANBP3Q9H6Z4 567 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 MRPL39Q9NYK5 338 aaKnown RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 RHCGQ9UBD6 479 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF222Q9UK12 451 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 NCKAP1Q9Y2A7 1128 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 RRN3P2A6NIE6 340 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 DRGXA6NNA5 263 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 FAM227AF5H4B4 570 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 PSIP1O75475 530 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SLC25A14O95258 325 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 PRAMEF1O95521 474 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 TBX18O95935 607 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 THP07101 528 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 MMP3P08254 477 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 HMBSP08397 361 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 NAT2P11245 290 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CPEP16870 476 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 PCGF2P35227 344 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 LIMS1P48059 325 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CCT3P49368 545 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 INPP1P49441 399 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 EVX1P49640 407 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 MAP2K6P52564 334 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 EPHA5P54756 1037 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 RPS25P62851 125 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 UBE3AQ05086 875 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SF1Q15637 639 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CCDC85BQ15834 202 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SPDYE7PQ495Y7 208 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 MPPE1Q53F39 396 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SDHAF4Q5VUM1 108 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF57Q68EA5 555 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CLDN19Q8N6F1 224 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 C1orf52Q8N6N3 182 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 LRRC17Q8N6Y2 441 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF655Q8N720 491 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CDC26Q8NHZ8 85 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 TMEM163Q8TC26 289 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 UBTD2Q8WUN7 234 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 TM9SF4Q92544 642 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 AP3S1Q92572 193 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 UCN3Q969E3 161 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CREB3L1Q96BA8 519 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 C1GALT1C1Q96EU7 318 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 MED18Q9BUE0 208 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 MED28Q9H204 178 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 NMNAT1Q9HAN9 279 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 TNFRSF10DQ9UBN6 386 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 PRSS21Q9Y6M0 314 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 BRWD3Q6RI45 1802 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SMIM35A0A1B0GVV1 85 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 C1orf226A1L170 272 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 INSIG1O15503 277 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF623O75123 536 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 PPM1BO75688 479 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 GADD45GO95257 159 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 MPC2O95563 127 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 HK1P19367 917 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 PRPH2P23942 346 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SSTR2P30874 369 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 BMP8BP34820 402 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms