RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 C16orf47Q6ZP98 133 aaPredicted RBP17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 CTAGE3PQ8IX95 158 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 CYP4Z2PQ8N1L4 340 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 PPM1NQ8N819 430 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 TRPV3Q8NET8 790 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 B3GNT7Q8NFL0 401 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 CREB3L4Q8TEY5 395 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 UBLCP1Q8WVY7 318 aaPredicted RBP17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 CPNE1Q99829 537 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 AIF1LQ9BQI0 150 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 ACSS3Q9H6R3 686 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 MCCC2Q9HCC0 563 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 PNO1Q9NRX1 252 aaKnown RBP17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 COQ3Q9NZJ6 369 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 SLC22A14Q9Y267 594 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 VWA7Q9Y334 891 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 URADA6NGE7 173 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 KLRC4-KLRK1H3BQV0 150 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 TGFBR3LH3BV60 316 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 CDC7O00311 574 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 PRKNO60260 465 aaPredicted RBP17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 ERLIN1O75477 346 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 ITGA10O75578 1167 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 PDE9AO76083 593 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 TFEBP19484 476 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 CAPN3P20807 821 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 CLCN2P51788 898 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 BTN3A2P78410 334 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 NAB1Q13506 487 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 EID3Q8N140 333 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 RPRMLQ8N4K4 120 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 TMEM156Q8N614 296 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 TMEM52Q8NDY8 209 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 ARMC2Q8NEN0 867 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 OR52N2Q8NGI0 321 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 UHMK1Q8TAS1 419 aaKnown RBP17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 SREK1Q8WXA9 508 aaKnown RBP17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 TREX2Q9BQ50 279 aaPredicted RBP17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 EPB41L4BQ9H329 900 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 CLK4Q9HAZ1 481 aaKnown RBP17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 TXNDC16Q9P2K2 825 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 PSAT1Q9Y617 370 aa17.02■□□□□ 0.32
RHBDF1-209ENST00000486045 NPEPPSL1A6NEC2 478 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 SERPINA6P08185 405 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 HNRNPFP52597 415 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 ILF2Q12905 390 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 RUNX2Q13950 521 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 C18orf21Q32NC0 220 aaPredicted RBP17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 GRTP1Q5TC63 336 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 FAM45BPQ6NSW5 357 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 SCUBE1Q8IWY4 988 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 ZFP62Q8NB50 900 aaPredicted RBP17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 C16orf52Q8NHV5 167 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 FAM45AQ8TCE6 357 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 NCLNQ969V3 563 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 UCK2Q9BZX2 261 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 LIN28AQ9H9Z2 209 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 NPDC1Q9NQX5 325 aaPredicted RBP17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 DEPPQ9NTK1 212 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 KCMF1Q9P0J7 381 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 MMACHCQ9Y4U1 282 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 CLDN16Q9Y5I7 305 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 C2CD3Q4AC94 2353 aa17.01■□□□□ 0.31
RHBDF1-209ENST00000486045 CACNA1CQ13936 2221 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 CCDC151A5D8V7 595 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 NKX2-6A6NCS4 301 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 FAM90A27PA6NNH2 459 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 SAT1P21673 171 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 HNRNPH1P31943 449 aaKnown RBP17■□□□□ 0.31
RHBDF1-209ENST00000486045 HSD17B3P37058 310 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 GP5P40197 560 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 ZNF460Q14592 562 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 UAP1Q16222 522 aaPredicted RBP17■□□□□ 0.31
RHBDF1-209ENST00000486045 MREGQ8N565 214 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 PDLIM5Q96HC4 596 aaKnown RBP17■□□□□ 0.31
RHBDF1-209ENST00000486045 CCDC77Q9BR77 488 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 MCMBPQ9BTE3 642 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 DEFB127Q9H1M4 99 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 PLSCR2Q9NRY7 297 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 CORO1CQ9ULV4 474 aaPredicted RBP17■□□□□ 0.31
RHBDF1-209ENST00000486045 RNF6Q9Y252 685 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 KCNE2Q9Y6J6 123 aa17■□□□□ 0.31
RHBDF1-209ENST00000486045 PINLYPA6NC86 204 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 POC1B-GALNT4F8VUJ3 575 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 ZNF37AP17032 561 aaPredicted RBP16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 IGFBP2P18065 325 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 GDF5P43026 501 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 SSR4P51571 173 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 GPR143P51810 404 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 EFTUD2Q15029 972 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■□□□□ 10.7
RHBDF1-209ENST00000486045 TERF2Q15554 542 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 EMC4Q5J8M3 183 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 CLNKQ7Z7G1 428 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 ZC3HC1Q86WB0 502 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 CCDC71Q8IV32 467 aaPredicted RBP16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 FAM47BQ8NA70 645 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 CCT6BQ92526 530 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 GAL3ST3Q96A11 431 aa16.99■□□□□ 0.31
RHBDF1-209ENST00000486045 MRRFQ96E11 262 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms