RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MKL2Q9ULH7 1088 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 POLHQ9Y253 713 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SSUH2Q9Y2M2 353 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 RAP2CQ9Y3L5 183 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 MMACHCQ9Y4U1 282 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 GNG14A0A1W2PPG7 69 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 CDC14CA4D256 554 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 TRPC5OSA6NMA1 111 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 IDSB3KWA1 339 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 KLF11O14901 512 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 KLF7O75840 302 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-208ENST00000485618 PDYNP01213 254 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 FHP07954 510 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 FAM58BPP0C7Q3 252 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 C8orf89P0DMQ9 161 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 NR1D1P20393 614 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 MAPK1P28482 360 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 OTX2P32243 289 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 RPL14P50914 215 aaKnown RBP7.81□□□□□ -1.16
SF3A1-208ENST00000485618 MAPK12P53778 367 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 HSD17B7P56937 341 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 RAB38P57729 211 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 KLC1Q07866 573 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 HYAL2Q12891 473 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 SLC13A2Q13183 592 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 MAD2L1Q13257 205 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-208ENST00000485618 SERTAD2Q14140 314 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 ERV3-1Q14264 604 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 NSDHLQ15738 373 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 SH2D4BQ5SQS7 431 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 FAM198BQ6UWH4 519 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 RNF165Q6ZSG1 346 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 MED25Q71SY5 747 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 CRLF3Q8IUI8 442 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 DDIASQ8IXT1 998 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 SAMD14Q8IZD0 417 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-208ENST00000485618 AMER3Q8N944 861 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 TMEM102Q8N9M5 508 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-208ENST00000485618 CLEC1AQ8NC01 280 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 TANKQ92844 425 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 PPP3R2Q96LZ3 170 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 ARHGAP9Q9BRR9 750 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 MECRQ9BV79 373 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 SHCBP1LQ9BZQ2 653 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 DDX31Q9H8H2 851 aaKnown RBP7.81□□□□□ -1.16
SF3A1-208ENST00000485618 PRDM9Q9NQV7 894 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 PRDM7Q9NQW5 492 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 IL17BQ9UHF5 180 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 DAPP1Q9UN19 280 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 MAN2B2Q9Y2E5 1009 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 TMED5Q9Y3A6 229 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 HEMK1Q9Y5R4 338 aaPredicted RBP7.81□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF462Q96JM2 2506 aa7.81□□□□□ -1.16
SF3A1-208ENST00000485618 SAP18O00422 153 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PPP6CO00743 305 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 UBFD1O14562 309 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 B4GALT2O60909 372 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 CTNSO60931 367 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ALOX12BO75342 701 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 SEC22BO75396 215 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 RSL1D1O76021 490 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 SCELO95171 688 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 WISP1O95388 367 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 KLK1P06870 262 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PRKAR1AP10644 381 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 COX7A2P14406 83 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ACPPP15309 386 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 BGNP21810 368 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 CPN2P22792 545 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 CCR10P46092 362 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 LIM2P55344 173 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 KCNC4Q03721 635 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 CDC20Q12834 499 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 STX4Q12846 297 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 NFATC3Q12968 1075 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 MPP2Q14168 576 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 HEPACAMQ14CZ8 416 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ABRAXAS2Q15018 415 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 TTMPQ5BVD1 217 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 VWA2Q5GFL6 755 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 BORAQ6PGQ7 559 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 QSOX2Q6ZRP7 698 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ZCCHC23Q6ZST2 131 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 RPS27LQ71UM5 84 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 VN1R5Q7Z5H4 357 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PDSS2Q86YH6 399 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 WDR75Q8IWA0 830 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PRSS58Q8IYP2 241 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 METTL4Q8N3J2 472 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 EFCAB3Q8N7B9 438 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PLPP5Q8NEB5 264 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 APOBEC4Q8WW27 367 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ZBTB9Q96C00 473 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PEX11GQ96HA9 241 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PTCHD1Q96NR3 888 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 PELOQ9BRX2 385 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 TRIM4Q9C037 500 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 SOX17Q9H6I2 414 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms