RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 CRTC2Q53ET0 693 aaPredicted RBP18.79■□□□□ 0.6
COL6A2-208ENST00000485591 SPDYAQ5MJ70 313 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 ACSM2BQ68CK6 577 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 MRM1Q6IN84 353 aaKnown RBP18.79■□□□□ 0.6
COL6A2-208ENST00000485591 CYP20A1Q6UW02 462 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 RGS9BPQ6ZS82 235 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 Q6ZSR9 355 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 OR2T11Q8NH01 316 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 C11orf24Q96F05 449 aaPredicted RBP18.79■□□□□ 0.6
COL6A2-208ENST00000485591 APIPQ96GX9 242 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 C7orf26Q96N11 449 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 RBCK1Q9BYM8 510 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 PFDN4Q9NQP4 134 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 LANCL2Q9NS86 450 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 PNPOQ9NVS9 261 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 KCMF1Q9P0J7 381 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 PHF11Q9UIL8 331 aa18.79■□□□□ 0.6
COL6A2-208ENST00000485591 ARHGAP10A1A4S6 786 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 ZNF891A8MT65 544 aaPredicted RBP18.78■□□□□ 0.6
COL6A2-208ENST00000485591 EFSO43281 561 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 TMPRSS11DO60235 418 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 JRKO75564 520 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 KLK1P06870 262 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 CYC1P08574 325 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 ITPKBP27987 946 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 MC1RQ01726 317 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 IL10RAQ13651 578 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 NR6A1Q15406 480 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 TUBB8Q3ZCM7 444 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 FAM69BQ5VUD6 431 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 GALNT18Q6P9A2 607 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 CCDC81Q6ZN84 652 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 SHISA6Q6ZSJ9 500 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 TMEM151BQ8IW70 566 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 PRSS58Q8IYP2 241 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 FAM76AQ8TAV0 307 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 C19orf60Q96EN9 201 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 MAPKAP1Q9BPZ7 522 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 CRB3Q9BUF7 120 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 MS4A12Q9NXJ0 267 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 MCM8Q9UJA3 840 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 SPACA6W5XKT8 324 aa18.78■□□□□ 0.6
COL6A2-208ENST00000485591 IDSB3KWA1 339 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 LSM1O15116 133 aaKnown RBP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 GBAP04062 536 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 JUNP05412 331 aaKnown RBP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 FAM58BPP0C7Q3 252 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 TIA1P31483 386 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 HNRNPH2P55795 449 aaKnown RBP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 TMPRSS3P57727 454 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 RAE1P78406 368 aaKnown RBP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 BTKQ06187 659 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 SSPNQ14714 243 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 PDCD2Q16342 344 aaPredicted RBP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 UGT8Q16880 541 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 CCNYL2Q5T2Q4 361 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 GPR180Q86V85 440 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 LAPTM4BQ86VI4 370 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 FAM47BQ8NA70 645 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 ZSCAN1Q8NBB4 408 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 PIWIL2Q8TC59 973 aaKnown RBP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 CSF3RQ99062 836 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 LRTM1Q9HBL6 345 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 SEMA3GQ9NS98 782 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 C1orf109Q9NX04 203 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 C3orf18Q9UK00 162 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 FBXW2Q9UKT8 454 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 MRPS33Q9Y291 106 aaKnown RBP18.77■□□□□ 0.6
COL6A2-208ENST00000485591 ASB4Q9Y574 426 aa18.77■□□□□ 0.6
COL6A2-208ENST00000485591 BLACEA4D250 179 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 SRRM3A6NNA2 597 aaPredicted RBP18.76■□□□□ 0.59
COL6A2-208ENST00000485591 FAM227AF5H4B4 570 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 SLCO1B7G3V0H7 640 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 CYR61O00622 381 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 PCDH7O60245 1069 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 IGHEP01854 428 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 CPN2P22792 545 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 HK2P52789 917 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 EFNA3P52797 238 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 MAPK12P53778 367 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 TNFRSF17Q02223 184 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 ERV3-1Q14264 604 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 KIAA0040Q15053 153 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 MINDY4Q4G0A6 757 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 MFSD4BQ5TF39 518 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 QSOX2Q6ZRP7 698 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 CRLF3Q8IUI8 442 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 EFCAB3Q8N7B9 438 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 ADAMTS17Q8TE56 1095 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 NACC2Q96BF6 587 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 PPP3R2Q96LZ3 170 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 C3orf30Q96M34 536 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 VN1R1Q9GZP7 353 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 SLCO1B3Q9NPD5 702 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 RIC8BQ9NVN3 520 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 MARCOQ9UEW3 520 aaPredicted RBP18.76■□□□□ 0.59
COL6A2-208ENST00000485591 MKL2Q9ULH7 1088 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 ATG4BQ9Y4P1 393 aa18.76■□□□□ 0.59
COL6A2-208ENST00000485591 K7ENP7 123 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 PCDH17O14917 1159 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms