RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 CHSY3Q70JA7 882 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 RPS19BP1Q86WX3 136 aaKnown RBP21.91■■□□□ 1.1
C9orf3-215ENST00000478473 TEX9Q8N6V9 391 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 B3GNT7Q8NFL0 401 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 DCAKDQ8WVC6 231 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 CMTM7Q96FZ5 175 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 TMCO1Q9UM00 188 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 SLC5A6Q9Y289 635 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 ICE1Q9Y2F5 2266 aa21.91■■□□□ 1.1
C9orf3-215ENST00000478473 A0A087WUV0 522 aaPredicted RBP21.9■■□□□ 1.1
C9orf3-215ENST00000478473 CTNSO60931 367 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 KRT38O76015 456 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 RASAL1O95294 804 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 F10P00742 488 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 LDLRP01130 860 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 CRYABP02511 175 aaKnown RBP21.9■■□□□ 1.1
C9orf3-215ENST00000478473 RBP1P09455 135 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 RNF224P0DH78 156 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 GFAPP14136 432 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 ATP5A1P25705 553 aaKnown RBP21.9■■□□□ 1.1
C9orf3-215ENST00000478473 TRHRP34981 398 aaPredicted RBP21.9■■□□□ 1.1
C9orf3-215ENST00000478473 PIK3CGP48736 1102 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 TAOK1Q7L7X3 1001 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 KIF2BQ8N4N8 673 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 L3MBTL4Q8NA19 623 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 C7orf57Q8NEG2 295 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 SIGLEC12Q96PQ1 595 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 UTP23Q9BRU9 249 aaKnown RBP21.9■■□□□ 1.1
C9orf3-215ENST00000478473 PPT2Q9UMR5 302 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 PCDHGA11Q9Y5H2 935 aa21.9■■□□□ 1.1
C9orf3-215ENST00000478473 STX16-NPEPL1H3BU86 382 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 STX16O14662 325 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 HIST1H1TP22492 207 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-215ENST00000478473 MLF1P58340 268 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 TSNAXIP1Q2TAA8 658 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 ZNF766Q5HY98 468 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 KHDRBS2Q5VWX1 349 aaKnown RBP21.89■■□□□ 1.09
C9orf3-215ENST00000478473 CYP4X1Q8N118 509 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 ACOT4Q8N9L9 421 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 VPS11Q9H270 941 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 CDCP1Q9H5V8 836 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 COPS7BQ9H9Q2 264 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-215ENST00000478473 ADAP2Q9NPF8 381 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 IKBKGQ9Y6K9 419 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 MAST4O15021 2626 aa21.89■■□□□ 1.09
C9orf3-215ENST00000478473 SVILO95425 2214 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 ASPDHA6ND91 283 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 GABRR3A8MPY1 467 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 CYSRT1A8MQ03 144 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 NEURL1O76050 574 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 STSP08842 583 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 GTF2H2Q13888 395 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 OR1C1Q15619 314 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 GTF2H2CQ6P1K8 395 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 TRMT10CQ7L0Y3 403 aaKnown RBP21.88■■□□□ 1.09
C9orf3-215ENST00000478473 IFT20Q8IY31 132 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 HORMAD2Q8N7B1 307 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 HUS1BQ8NHY5 278 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 CSF3RQ99062 836 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 DMRT3Q9NQL9 472 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 ZNF358Q9NW07 568 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 VTI1BQ9UEU0 232 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 ZNF223Q9UK11 482 aaPredicted RBP21.88■■□□□ 1.09
C9orf3-215ENST00000478473 NFU1Q9UMS0 254 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 ANGPTL3Q9Y5C1 460 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 ZGRF1Q86YA3 2104 aa21.88■■□□□ 1.09
C9orf3-215ENST00000478473 TGFB1P01137 390 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 CLCN2P51788 898 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 ELAVL1Q15717 326 aaKnown RBP21.87■■□□□ 1.09
C9orf3-215ENST00000478473 AP5B1Q2VPB7 878 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 C4orf17Q53FE4 359 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 TIFABQ6ZNK6 161 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 GOLGA7Q7Z5G4 137 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 ZNF227Q86WZ6 799 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 CNPY4Q8N129 248 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 ZCCHC7Q8N3Z6 543 aaKnown RBP21.87■■□□□ 1.09
C9orf3-215ENST00000478473 TMEM151AQ8N4L1 468 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 FAM47BQ8NA70 645 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 VMP1Q96GC9 406 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 MAGEB10Q96LZ2 347 aaPredicted RBP21.87■■□□□ 1.09
C9orf3-215ENST00000478473 TXLNGYQ9BZA5 131 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 IPPKQ9H8X2 491 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 ACTR8Q9H981 624 aa21.87■■□□□ 1.09
C9orf3-215ENST00000478473 UTP20O75691 2785 aaKnown RBP21.86■■□□□ 1.09
C9orf3-215ENST00000478473 LRRC14BA6NHZ5 514 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 MYO1DO94832 1006 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 SIX3O95343 332 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-215ENST00000478473 PCNAP12004 261 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 CD46P15529 392 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 GCAP28676 217 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 TPP2P29144 1249 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-215ENST00000478473 IGLV3-21P80748 117 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-215ENST00000478473 SLC13A2Q13183 592 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 CUL3Q13618 768 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 OR4C11Q6IEV9 310 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 WDR20Q8TBZ3 569 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 REPS1Q96D71 796 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 MAPKAP1Q9BPZ7 522 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 NTMT1Q9BV86 223 aa21.86■■□□□ 1.09
C9orf3-215ENST00000478473 ZNF717Q9BY31 904 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms