RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TTLL8A6PVC2 850 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 A8MUA0 341 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 TGFBR3LH3BV60 316 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 PLPP1O14494 284 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 GLRA3O75311 464 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 SUPT7LO94864 414 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 SCELO95171 688 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 UQCRHP07919 91 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 PTX3P26022 381 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-206ENST00000478214 AP2B1P63010 937 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 PHEXP78562 749 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 IGFBP7Q16270 282 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 ZNF678Q5SXM1 525 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 FAM219BQ5XKK7 198 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 FRG2Q64ET8 278 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 OR4C11Q6IEV9 310 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 LETMD1Q6P1Q0 360 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 Q6ZS92 163 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 CNTRLQ7Z7A1 2325 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 SCUBE1Q8IWY4 988 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 ARMC2Q8NEN0 867 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 ADAMTS18Q8TE60 1221 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 PPP4R1Q8TF05 950 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 CAVIN3Q969G5 261 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 MAGEB10Q96LZ2 347 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-206ENST00000478214 FRG2BQ96QU4 278 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 LMF1Q96S06 567 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 CENPKQ9BS16 269 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 C12orf65Q9H3J6 166 aaKnown RBP14.62□□□□□ -0.07
HMGA1-206ENST00000478214 LYRM4Q9HD34 91 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 SLAMF7Q9NQ25 335 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 PRTFDC1Q9NRG1 225 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 ZNF225Q9UK10 706 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 FBXW2Q9UKT8 454 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 MRPS33Q9Y291 106 aaKnown RBP14.62□□□□□ -0.07
HMGA1-206ENST00000478214 B3GNT3Q9Y2A9 372 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 CLDN16Q9Y5I7 305 aa14.62□□□□□ -0.07
HMGA1-206ENST00000478214 A8MUI8 341 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 G3V2L1 256 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 FOXE1O00358 373 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-206ENST00000478214 CLDN4O14493 209 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 OTCP00480 354 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 PROCP04070 461 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 KRT4P19013 534 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 IMPDH1P20839 514 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 PRKAA2P54646 552 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 HSD17B7P56937 341 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 SLC26A5P58743 744 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 CLCQ05315 142 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 IFFO1Q0D2I5 559 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 SLC13A2Q13183 592 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 RCN2Q14257 317 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 EXT1Q16394 746 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 GGTA1PQ4G0N0 100 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 PRR30Q53SZ7 412 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-206ENST00000478214 SGO1Q5FBB7 561 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 TTC19Q6DKK2 380 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-206ENST00000478214 CLNKQ7Z7G1 428 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 SLC22A9Q8IVM8 553 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 ZNF595Q8IYB9 648 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 C4orf33Q8N1A6 199 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 M1APQ8TC57 530 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 ZNF717Q9BY31 904 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-206ENST00000478214 ILKAPQ9H0C8 392 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-206ENST00000478214 MMP25Q9NPA2 562 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 PLA2G3Q9NZ20 509 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 PLAAQ9Y263 795 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 SCN2AQ99250 2005 aa14.61□□□□□ -0.07
HMGA1-206ENST00000478214 PRRC2CQ9Y520 2896 aaKnown RBP14.6□□□□□ -0.07
HMGA1-206ENST00000478214 MYOCOSA0A1B0GUC4 107 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 COPEO14579 308 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 PLIN3O60664 434 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 EEDO75530 441 aaKnown RBP14.6□□□□□ -0.07
HMGA1-206ENST00000478214 OR4F21O95013 312 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 PPP2R1BP30154 601 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 CRHR1P34998 444 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 BSGP35613 385 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 CCT5P48643 541 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 FOXK1P85037 733 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 SLC18A2Q05940 514 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 IFT88Q13099 833 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 SLAMF1Q13291 335 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 CUL3Q13618 768 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 FCRLBQ6BAA4 426 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 ZYG11AQ6WRX3 759 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 CUZD1Q86UP6 607 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 CATSPER1Q8NEC5 780 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 DNAJB14Q8TBM8 379 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 CPT1CQ8TCG5 803 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 CNDP1Q96KN2 507 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 ELOVL6Q9H5J4 265 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 KCNK13Q9HB14 408 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 FARSBQ9NSD9 589 aaKnown RBP14.6□□□□□ -0.07
HMGA1-206ENST00000478214 GRID1Q9ULK0 1009 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 PPT2Q9UMR5 302 aa14.6□□□□□ -0.07
HMGA1-206ENST00000478214 TENM4Q6N022 2769 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 MYO18BQ8IUG5 2567 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 SAGE2PA6NJ88 616 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 CTNSO60931 367 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms