RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 HECTD2Q5U5R9 776 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 C1orf146Q5VVC0 180 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PAPD7Q5XG87 772 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF470Q6ECI4 717 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 SNRNP48Q6IEG0 339 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 OR5M10Q6IEU7 315 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PYHIN1Q6K0P9 492 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC35D2Q76EJ3 337 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 RNF44Q7L0R7 432 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 NIPA1Q7RTP0 329 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 P4HA3Q7Z4N8 544 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PRSS42Q7Z5A4 293 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ABHD12BQ7Z5M8 362 aaPredicted RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ABI3BPQ7Z7G0 1075 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PAQR7Q86WK9 346 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 NRROSQ86YC3 692 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 LDLRAD3Q86YD5 345 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF280BQ86YH2 543 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 MMP21Q8N119 569 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ELMOD1Q8N336 334 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 LNX2Q8N448 690 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ZBTB2Q8N680 514 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 CCNYQ8ND76 341 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 OR9K2Q8NGE7 335 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 OR56B1Q8NGI3 324 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 RP9Q8TA86 221 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 SUN3Q8TAQ9 357 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF473Q8WTR7 871 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 CACNG8Q8WXS5 425 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 LINC00476Q8WZB0 136 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ELMO1Q92556 727 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 FIG4Q92562 907 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PSMG2Q969U7 264 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 MIB2Q96AX9 1013 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 DAZAP1Q96EP5 407 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 LMLNQ96KR4 655 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 LINC00615Q96LM1 132 aaPredicted RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PPP1R36Q96LQ0 422 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 Q96MF0 132 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ASCL2Q99929 193 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 LBHD1Q9BQE6 289 aaPredicted RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 CNPY3Q9BT09 278 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ALKBH7Q9BT30 221 aaPredicted RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 DUSP26Q9BV47 211 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 HOXD1Q9GZZ0 328 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 DDX47Q9H0S4 455 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ATG10Q9H0Y0 220 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ALX4Q9H161 411 aaPredicted RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 MMP27Q9H306 513 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 LRRN3Q9H3W5 708 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 TOR3AQ9H497 397 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC32A1Q9H598 525 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 C11orf49Q9H6J7 331 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 RIOX1Q9H6W3 641 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 RANBP3Q9H6Z4 567 aaPredicted RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 AKIRIN1Q9H9L7 192 aaPredicted RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 ZFP14Q9HCL3 533 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 UFSP2Q9NUQ7 469 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 POT1Q9NUX5 634 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 MED17Q9NVC6 651 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 FAIMQ9NVQ4 179 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 MS4A12Q9NXJ0 267 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 NDE1Q9NXR1 346 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 CLEC5AQ9NY25 188 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 HCN3Q9P1Z3 774 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PTGFRNQ9P2B2 879 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 NOCTQ9UK39 431 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 UTS2RQ9UKP6 389 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 VPS4AQ9UN37 437 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 HPSEQ9Y251 543 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 WBP11Q9Y2W2 641 aaKnown RBP3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PCDHAC2Q9Y5I4 1007 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 NUP155O75694 1391 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 JCADQ9P266 1359 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 PTPRUQ92729 1446 aa3.36□□□□□ -1.87
FNDC3B-209ENST00000478016 KIF1BO60333 1816 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A1W2PQF6 199 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A1W2PRG0 241 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 DPPA5A6NC42 116 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 OR2W5A6NFC9 320 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 C5orf52A6NGY3 159 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 CD8B2A6NJW9 211 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 WASHC1A8K0Z3 465 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PSMD3O43242 534 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 SPRY1O43609 319 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TLX3O43711 291 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 TRIAP1O43715 76 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 GLRA3O75311 464 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 NOL4O94818 638 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 LDOC1O95751 146 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 GCP02774 474 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 LCATP04180 440 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ENO1P06733 434 aaKnown RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PGK2P07205 417 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 GRPP07492 148 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 MMP3P08254 477 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 ANXA4P09525 319 aaPredicted RBP3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 RPA2P15927 270 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 PSMC3P17980 439 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms