RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 CLCN2P51788 898 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 HNRNPFP52597 415 aaKnown RBP12.91□□□□□ -0.34
HDAC7-222ENST00000477937 OC90Q02509 493 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-222ENST00000477937 PCBP2Q15366 365 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDAC7-222ENST00000477937 TERF2Q15554 542 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 OR1C1Q15619 314 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 AP5B1Q2VPB7 878 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 METTL2BQ6P1Q9 378 aaKnown RBP12.91□□□□□ -0.34
HDAC7-222ENST00000477937 UBE3DQ7Z6J8 389 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-222ENST00000477937 ACOT4Q8N9L9 421 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 MDS2Q8NDY4 140 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 TMEM52Q8NDY8 209 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 B3GNT7Q8NFL0 401 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 TRIM44Q96DX7 344 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-222ENST00000477937 CMTM7Q96FZ5 175 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 SIGLEC12Q96PQ1 595 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 CENPKQ9BS16 269 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 ACTR8Q9H981 624 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 LYRM4Q9HD34 91 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 KCMF1Q9P0J7 381 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
HDAC7-222ENST00000477937 OSGIN2Q9Y236 505 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 SPACA6W5XKT8 324 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 POLEQ07864 2286 aa12.91□□□□□ -0.34
HDAC7-222ENST00000477937 USP9XQ93008 2570 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-222ENST00000477937 LRRK2Q5S007 2527 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 WIPF3A6NGB9 483 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 FCHO1O14526 889 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 UGDHO60701 494 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 CTNSO60931 367 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 SH3BGRLO75368 114 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 LDLRP01130 860 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 COL6A2P12110 1019 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
HDAC7-222ENST00000477937 PIK3CBP42338 1070 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 SSR2P43308 183 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 PIK3CGP48736 1102 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 STX4Q12846 297 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 DDX39BQ13838 428 aaKnown RBP12.9□□□□□ -0.34
HDAC7-222ENST00000477937 TSNAXIP1Q2TAA8 658 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 C4orf17Q53FE4 359 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 TECRLQ5HYJ1 363 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 DEPDC1Q5TB30 811 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 KHDRBS2Q5VWX1 349 aaKnown RBP12.9□□□□□ -0.34
HDAC7-222ENST00000477937 SPINK14Q6IE38 97 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 CLNKQ7Z7G1 428 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 IFT20Q8IY31 132 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 PLD6Q8N2A8 252 aaKnown RBP12.9□□□□□ -0.34
HDAC7-222ENST00000477937 TMEM178AQ8NBL3 297 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 APCDD1LQ8NCL9 501 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 HUS1BQ8NHY5 278 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 UHMK1Q8TAS1 419 aaKnown RBP12.9□□□□□ -0.34
HDAC7-222ENST00000477937 ISL2Q96A47 359 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 RGMAQ96B86 450 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 REPS1Q96D71 796 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 SCYL1Q96KG9 808 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 CSF3RQ99062 836 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 IPPKQ9H8X2 491 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 ADAP2Q9NPF8 381 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 ZNF358Q9NW07 568 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 LRFN1Q9P244 771 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 PLEKHB1Q9UF11 243 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-222ENST00000477937 ZNF180Q9UJW8 692 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 TSC22D4Q9Y3Q8 395 aa12.9□□□□□ -0.34
HDAC7-222ENST00000477937 DIDO1Q9BTC0 2240 aaKnown RBP12.89□□□□□ -0.35
HDAC7-222ENST00000477937 LRRC14BA6NHZ5 514 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 CYSRT1A8MQ03 144 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 H0YIV9 168 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 TGFBR3LH3BV60 316 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 SAP18O00422 153 aaKnown RBP12.89□□□□□ -0.35
HDAC7-222ENST00000477937 RTCAO00442 366 aaKnown RBP12.89□□□□□ -0.35
HDAC7-222ENST00000477937 IFNA16P05015 189 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 RNF224P0DH78 156 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 HIST1H1TP22492 207 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-222ENST00000477937 TPP2P29144 1249 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-222ENST00000477937 MAGEA12P43365 314 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 CYB561P49447 251 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 RAP1GDS1P52306 607 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 PER3P56645 1201 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 MLF1P58340 268 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 PHEXP78562 749 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 GTF2H2Q13888 395 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 ELAVL1Q15717 326 aaKnown RBP12.89□□□□□ -0.35
HDAC7-222ENST00000477937 LGSNQ5TDP6 509 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 OR4C11Q6IEV9 310 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 GTF2H2CQ6P1K8 395 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 GFRALQ6UXV0 394 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 GOLGA7Q7Z5G4 137 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 ARMC10Q8N2F6 343 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 TMEM132CQ8N3T6 1108 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 FAM98AQ8NCA5 519 aaKnown RBP12.89□□□□□ -0.35
HDAC7-222ENST00000477937 C7orf57Q8NEG2 295 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 DCAKDQ8WVC6 231 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 PHF21BQ96EK2 531 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 VMP1Q96GC9 406 aa12.89□□□□□ -0.35
HDAC7-222ENST00000477937 SCMH1Q96GD3 660 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms