RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 GPR87Q9BY21 358 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 ILKAPQ9H0C8 392 aaPredicted RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 DDX31Q9H8H2 851 aaKnown RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 COPS7BQ9H9Q2 264 aaPredicted RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 MKKSQ9NPJ1 570 aaPredicted RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 MED4Q9NPJ6 270 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 THAP1Q9NVV9 213 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 HAO1Q9UJM8 370 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 DAPP1Q9UN19 280 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 ATG4BQ9Y4P1 393 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 ASB4Q9Y574 426 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 A0A1W2PR48 441 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 CYR61O00622 381 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 SEMA3DO95025 777 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 HSD3B1P14060 373 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 HSD3B2P26439 372 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 TGM3Q08188 693 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 SPDYAQ5MJ70 313 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 ATG16L1Q676U5 607 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 CCDC81Q6ZN84 652 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 PPP1R32Q7Z5V6 425 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 GBP7Q8N8V2 638 aaPredicted RBP14.96□□□□□ -0.01
COPS3-207ENST00000477299 SRFBP1Q8NEF9 429 aaKnown RBP14.96□□□□□ -0.01
COPS3-207ENST00000477299 OR2Y1Q8NGV0 311 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 ADAMTS17Q8TE56 1095 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 DYDC1Q8WWB3 177 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 TSLPQ969D9 159 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 TBC1D20Q96BZ9 403 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 C11orf24Q96F05 449 aaPredicted RBP14.96□□□□□ -0.01
COPS3-207ENST00000477299 TGIF2Q9GZN2 237 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 VN1R1Q9GZP7 353 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 WDR54Q9H977 334 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 TEX10Q9NXF1 929 aaPredicted RBP14.96□□□□□ -0.01
COPS3-207ENST00000477299 C3orf18Q9UK00 162 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 KCND3Q9UK17 655 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 MKL2Q9ULH7 1088 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 POLR3HQ9Y535 204 aaPredicted RBP14.96□□□□□ -0.01
COPS3-207ENST00000477299 CLDN16Q9Y5I7 305 aa14.96□□□□□ -0.01
COPS3-207ENST00000477299 CDC14CA4D256 554 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 GLOD5A6NK44 160 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 IDSB3KWA1 339 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 KLF11O14901 512 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 ALOX12BO75342 701 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 FHP07954 510 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 FAM58BPP0C7Q3 252 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 RNH1P13489 461 aaKnown RBP14.95□□□□□ -0.02
COPS3-207ENST00000477299 OTX2P32243 289 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 FOLR3P41439 243 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 RAB38P57729 211 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 RHAGQ02094 409 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 GUCY1A3Q02108 690 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 KIAA0040Q15053 153 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 ST3GAL2Q16842 350 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 IMPG1Q17R60 797 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 GALNTL6Q49A17 601 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 MINDY4Q4G0A6 757 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 RFTN2Q52LD8 501 aaPredicted RBP14.95□□□□□ -0.02
COPS3-207ENST00000477299 XKR7Q5GH72 579 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 CCNYL2Q5T2Q4 361 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 C10orf62Q5T681 223 aaPredicted RBP14.95□□□□□ -0.02
COPS3-207ENST00000477299 MFSD4BQ5TF39 518 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 VWA5B1Q5TIE3 1220 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 FAM47EQ6ZV65 393 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 LANCL3Q6ZV70 420 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 MAVSQ7Z434 540 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 NUDT13Q86X67 352 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 TRIM42Q8IWZ5 723 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 OR4N5Q8IXE1 308 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 ZCCHC7Q8N3Z6 543 aaKnown RBP14.95□□□□□ -0.02
COPS3-207ENST00000477299 RAB3IL1Q8TBN0 382 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 LRRC8CQ8TDW0 803 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 C8orf44Q96CB5 159 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 TM4SF18Q96CE8 201 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 CRB3Q9BUF7 120 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 NPLQ9BXD5 320 aaPredicted RBP14.95□□□□□ -0.02
COPS3-207ENST00000477299 NUF2Q9BZD4 464 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 NECTIN3Q9NQS3 549 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 DLGAP4Q9Y2H0 992 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 USP24Q9UPU5 2620 aa14.95□□□□□ -0.02
COPS3-207ENST00000477299 IGHV3-20A0A0C4DH32 117 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 A0A1W2PS29 197 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 SLC28A1O00337 649 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 ZNF195O14628 629 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 LSM1O15116 133 aaKnown RBP14.94□□□□□ -0.02
COPS3-207ENST00000477299 PGRMC2O15173 223 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 PROM1O43490 865 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 PEX11AO75192 247 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 SEC22BO75396 215 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 MAOAP21397 527 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 CPN2P22792 545 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 TACR1P25103 407 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 GYS2P54840 703 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 EMP2P54851 167 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 ID2Q02363 134 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 ZNF33BQ06732 778 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 PRSS53Q2L4Q9 553 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 CLNKQ7Z7G1 428 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 GPR180Q86V85 440 aa14.94□□□□□ -0.02
COPS3-207ENST00000477299 WDR75Q8IWA0 830 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms