RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 MMP25Q9NPA2 562 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 SEMA4BQ9NPR2 832 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 SLAMF7Q9NQ25 335 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 NECTIN3Q9NQS3 549 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 MS4A12Q9NXJ0 267 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 TEKT2Q9UIF3 430 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 SPACA6W5XKT8 324 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 TLDC2A0PJX2 215 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SMIM23A6NLE4 172 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 CTNSO60931 367 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SH3BGRLO75368 114 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SUPT7LO94864 414 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SORBS2O94875 1100 aaKnown RBP12.6□□□□□ -0.39
ACTN4-205ENST00000477174 MLYCDO95822 493 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 ITGAMP11215 1152 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 KRT4P19013 534 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SOX11P35716 441 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SSR2P43308 183 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 CD97P48960 835 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 NEK2P51955 445 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 CDH13P55290 713 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 NAA20P61599 178 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 RPS13P62277 151 aaKnown RBP12.6□□□□□ -0.39
ACTN4-205ENST00000477174 IFFO1Q0D2I5 559 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 IFT88Q13099 833 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SLAMF1Q13291 335 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 UNC50Q53HI1 259 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 TTC19Q6DKK2 380 aaPredicted RBP12.6□□□□□ -0.39
ACTN4-205ENST00000477174 H3F3CQ6NXT2 135 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 ZNF793Q6ZN11 406 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 LINC00696Q6ZRV3 163 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 ZCCHC7Q8N3Z6 543 aaKnown RBP12.6□□□□□ -0.39
ACTN4-205ENST00000477174 OR4F6Q8NGB9 312 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 DNAJB14Q8TBM8 379 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 TRPC4APQ8TEL6 797 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 HAS2Q92819 552 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 DDX31Q9H8H2 851 aaKnown RBP12.6□□□□□ -0.39
ACTN4-205ENST00000477174 PRTFDC1Q9NRG1 225 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 STMN3Q9NZ72 180 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 PTGFRNQ9P2B2 879 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 SNX6Q9UNH7 406 aa12.6□□□□□ -0.39
ACTN4-205ENST00000477174 NBASA2RRP1 2371 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 RP1L1Q8IWN7 2480 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-205ENST00000477174 DYTNA2CJ06 578 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 A8MUI8 341 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 FOXO6A8MYZ6 492 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 SAP18O00422 153 aaKnown RBP12.59□□□□□ -0.39
ACTN4-205ENST00000477174 RTCAO00442 366 aaKnown RBP12.59□□□□□ -0.39
ACTN4-205ENST00000477174 PPP6CO00743 305 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 PLPP1O14494 284 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 COPEO14579 308 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 CELA2AP08217 269 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 MLLT10P55197 1068 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 SLC26A5P58743 744 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 SLC18A2Q05940 514 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 SLC13A2Q13183 592 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 TLR1Q15399 786 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 TERF2Q15554 542 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 GPR180Q86V85 440 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 RNF175Q8N4F7 328 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 MREGQ8N565 214 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 SIRT6Q8N6T7 355 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 Q8NA96 180 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 OR2W6PQ8NHA6 318 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 RDH11Q8TC12 318 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 MTFMTQ96DP5 389 aaKnown RBP12.59□□□□□ -0.39
ACTN4-205ENST00000477174 L3HYPDHQ96EM0 354 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 MAPKAP1Q9BPZ7 522 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 RNF32Q9H0A6 362 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-205ENST00000477174 ELOVL6Q9H5J4 265 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 AHSPQ9NZD4 102 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.59□□□□□ -0.39
ACTN4-205ENST00000477174 EMCNQ9ULC0 261 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 STK38LQ9Y2H1 464 aa12.59□□□□□ -0.39
ACTN4-205ENST00000477174 V9GYY5 206 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-205ENST00000477174 G3V2L1 256 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 PLIN3O60664 434 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 SEMA3DO95025 777 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 WISP1O95388 367 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 PROCP04070 461 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 MYL2P10916 166 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 TLX1P31314 330 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-205ENST00000477174 BSGP35613 385 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 HNRNPFP52597 415 aaKnown RBP12.58□□□□□ -0.4
ACTN4-205ENST00000477174 TAS2R50P59544 299 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 DNAJB13P59910 316 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 FOXK1P85037 733 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 BIKQ13323 160 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 SERTAD2Q14140 314 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 INPP5JQ15735 1006 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-205ENST00000477174 COLEC12Q5KU26 742 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 ACER2Q5QJU3 275 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 ABHD17BQ5VST6 288 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 LETMD1Q6P1Q0 360 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 ZYG11AQ6WRX3 759 aa12.58□□□□□ -0.4
ACTN4-205ENST00000477174 RPS27LQ71UM5 84 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms