RNA–Protein interactions for RNA: ENST00000475881.5

PFKFB3-211, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 1 (best)

Gene PFKFB3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-211ENST00000475881 LYRM4Q9HD34 91 aa16.03■□□□□ 0.16
PFKFB3-211ENST00000475881 PNO1Q9NRX1 252 aaKnown RBP16.03■□□□□ 0.16
PFKFB3-211ENST00000475881 XPR1Q9UBH6 696 aa16.03■□□□□ 0.16
PFKFB3-211ENST00000475881 PCDHGA11Q9Y5H2 935 aa16.03■□□□□ 0.16
PFKFB3-211ENST00000475881 SAP18O00422 153 aaKnown RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 RTCAO00442 366 aaKnown RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 CYR61O00622 381 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 E2F3O00716 465 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 MAN1A2O60476 641 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 UGDHO60701 494 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 PRAMEF2O60811 474 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 ATP5A1P25705 553 aaKnown RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 EEF1DP29692 281 aaKnown RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 PIK3CBP42338 1070 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 PHEXP78562 749 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 INAQ16352 499 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 DEPDC1Q5TB30 811 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 KHDRBS2Q5VWX1 349 aaKnown RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 ZNF793Q6ZN11 406 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 RNF175Q8N4F7 328 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 BCORP1Q8N888 145 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 ACOT4Q8N9L9 421 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 LRRN4CLQ8ND94 238 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 NFAM1Q8NET5 270 aaPredicted RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 REPS1Q96D71 796 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 CSF3RQ99062 836 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 NPAS2Q99743 824 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 MRPL57Q9BQC6 102 aaKnown RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 UTP23Q9BRU9 249 aaKnown RBP16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 OR51B5Q9H339 312 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 CDCP1Q9H5V8 836 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 KCMF1Q9P0J7 381 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 TSC22D4Q9Y3Q8 395 aa16.02■□□□□ 0.16
PFKFB3-211ENST00000475881 SVILO95425 2214 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 H0YIV9 168 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 STX16-NPEPL1H3BU86 382 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 TGFBR3LH3BV60 316 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 STX16O14662 325 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 CTNSO60931 367 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 MYO1DO94832 1006 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 HIST1H1TP22492 207 aaPredicted RBP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 GCAP28676 217 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 ARL1P40616 181 aaPredicted RBP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 SSR2P43308 183 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 ST13P50502 369 aaKnown RBP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 RAP1GDS1P52306 607 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 TUBA3CQ13748 450 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 CPSF6Q16630 551 aaKnown RBP eCLIP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 TUBA3EQ6PEY2 450 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 ADGRD1Q6QNK2 874 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 CLNKQ7Z7G1 428 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 RPS19BP1Q86WX3 136 aaKnown RBP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 LGI4Q8N135 537 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 L3MBTL4Q8NA19 623 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 ST6GALNAC3Q8NDV1 305 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 ATP6V1E2Q96A05 226 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 RGMAQ96B86 450 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 MTBPQ96DY7 904 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 MTERF1Q99551 399 aaKnown RBP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 MAPKAP1Q9BPZ7 522 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 CENPKQ9BS16 269 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 MRPL46Q9H2W6 279 aaKnown RBP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 NOL11Q9H8H0 719 aaKnown RBP16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 DMRT3Q9NQL9 472 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 ANKRD10Q9NXR5 420 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 RNF11Q9Y3C5 154 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 SPACA6W5XKT8 324 aa16.01■□□□□ 0.15
PFKFB3-211ENST00000475881 HIVEP3Q5T1R4 2406 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 SYNDIG1LA6NDD5 238 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 GABRR3A8MPY1 467 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 SEMA7AO75326 666 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 SCELO95171 688 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 RASAL1O95294 804 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 CLDN9O95484 217 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 EDN3P14138 238 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 PTX3P26022 381 aaPredicted RBP16■□□□□ 0.15
PFKFB3-211ENST00000475881 PPP2R1BP30154 601 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 CD96P40200 585 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 CCNG1P51959 295 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 RPS13P62277 151 aaKnown RBP16■□□□□ 0.15
PFKFB3-211ENST00000475881 OC90Q02509 493 aaPredicted RBP16■□□□□ 0.15
PFKFB3-211ENST00000475881 SLC29A2Q14542 456 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 TERF2Q15554 542 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 ZNF766Q5HY98 468 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 OR4C11Q6IEV9 310 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 TIFABQ6ZNK6 161 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 GSPT2Q8IYD1 628 aaKnown RBP16■□□□□ 0.15
PFKFB3-211ENST00000475881 B3GNT7Q8NFL0 401 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 TAAR6Q96RI8 345 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 SORBS1Q9BX66 1292 aaKnown RBP16■□□□□ 0.15
PFKFB3-211ENST00000475881 DEFB126Q9BYW3 111 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 TXLNGYQ9BZA5 131 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 OLAHQ9NV23 265 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 PCTPQ9UKL6 214 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 FBXW2Q9UKT8 454 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 CLDN16Q9Y5I7 305 aa16■□□□□ 0.15
PFKFB3-211ENST00000475881 USP9YO00507 2555 aaPredicted RBP16■□□□□ 0.15
PFKFB3-211ENST00000475881 SPTAN1Q13813 2472 aaKnown RBP15.99■□□□□ 0.15
PFKFB3-211ENST00000475881 TRBV11-1A0A0K0K1C0 115 aa15.99■□□□□ 0.15
PFKFB3-211ENST00000475881 OR7A17O14581 309 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms