RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MIB2Q96AX9 1013 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 MVB12AQ96EY5 273 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 MMABQ96EY8 250 aaPredicted RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 CMTM7Q96FZ5 175 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 C3orf30Q96M34 536 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 PAIP2Q9BPZ3 127 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 C17orf62Q9BQA9 187 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 DPH2Q9BQC3 489 aaPredicted RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 MRPL1Q9BYD6 325 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NLNQ9BYT8 704 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 REXO4Q9GZR2 422 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 SLC26A1Q9H2B4 701 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF304Q9HCX3 659 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 LANCL2Q9NS86 450 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 PSD3Q9NYI0 1048 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NKIRAS1Q9NYS0 192 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 HCN3Q9P1Z3 774 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NDOR1Q9UHB4 597 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ADGRE2Q9UHX3 823 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 TRAF6Q9Y4K3 522 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 PCDHGA6Q9Y5G7 932 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 A0A0A6YYD5 115 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 WASHC1A8K0Z3 465 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TMEM114B3SHH9 223 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 NPIPB8E9PQR5 432 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 H0YIG0 161 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TGFBR3LH3BV60 316 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 CYR61O00622 381 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF195O14628 629 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 KLF11O14901 512 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 NKX2-8O15522 239 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SEMA7AO75326 666 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ULK1O75385 1050 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SEMA3DO95025 777 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 BMP10O95393 424 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 RECKO95980 971 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 KRT6AP02538 564 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 GBAP04062 536 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 KRT6BP04259 564 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 KLK3P07288 261 aaPredicted RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 RAB40ALP0C0E4 278 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 CCNYL3P0C7X3 344 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 UROSP10746 265 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 HIST1H1TP22492 207 aaPredicted RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 GRK2P25098 689 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 PTX3P26022 381 aaPredicted RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 PTPN4P29074 926 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TPP2P29144 1249 aaPredicted RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SERPINB1P30740 379 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SERPINB5P36952 375 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 DLSTP36957 453 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ARL1P40616 181 aaPredicted RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SLC1A6P48664 564 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 KRT6CP48668 564 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 STXBP1P61764 594 aaKnown RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ASPHQ12797 758 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 IFT88Q13099 833 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 STX3Q13277 289 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 IL10RAQ13651 578 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ERV3-1Q14264 604 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 KIAA0040Q15053 153 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 NDUFA9Q16795 377 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TMEM35AQ53FP2 167 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 XKR7Q5GH72 579 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SH2D4BQ5SQS7 431 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 C10orf62Q5T681 223 aaPredicted RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ATP1A1-AS1Q5TC04 95 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 FHL5Q5TD97 284 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 MRM1Q6IN84 353 aaKnown RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 RNF165Q6ZSG1 346 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SHISA6Q6ZSJ9 500 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ABHD13Q7L211 337 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 MAVSQ7Z434 540 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 CA13Q8N1Q1 262 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 METTL4Q8N3J2 472 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 IL22RA1Q8N6P7 574 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ACOT4Q8N9L9 421 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 OR51Q1Q8NH59 317 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 STT3BQ8TCJ2 826 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 AGR3Q8TD06 166 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ADAMTS17Q8TE56 1095 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 CHTF18Q8WVB6 975 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SELENOMQ8WWX9 145 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 FKBP10Q96AY3 582 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 REPS1Q96D71 796 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 APIPQ96GX9 242 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 CSF3RQ99062 836 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 MAPKAP1Q9BPZ7 522 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TBCDQ9BTW9 1192 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TGIF2Q9GZN2 237 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ACTL8Q9H568 366 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ELOVL6Q9H5J4 265 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 DDX31Q9H8H2 851 aaKnown RBP6.59□□□□□ -1.35
LIMD1-204ENST00000474665 MANSC1Q9H8J5 431 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 BRF2Q9HAW0 419 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 ANKHQ9HCJ1 492 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 SLCO1B3Q9NPD5 702 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TXLNGQ9NUQ3 528 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 PNPOQ9NVS9 261 aa6.59□□□□□ -1.35
LIMD1-204ENST00000474665 TRPC4Q9UBN4 977 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms