RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 PTX3P26022 381 aaPredicted RBP19.18■□□□□ 0.66
SNX13-206ENST00000474067 LIM2P55344 173 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 BTG2P78543 158 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 IRF9Q00978 393 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 GTF2H2Q13888 395 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 RUNX2Q13950 521 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 ELAVL1Q15717 326 aaKnown RBP19.18■□□□□ 0.66
SNX13-206ENST00000474067 KHDRBS2Q5VWX1 349 aaKnown RBP19.18■□□□□ 0.66
SNX13-206ENST00000474067 GTF2H2CQ6P1K8 395 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 PSD3Q9NYI0 1048 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 PHF11Q9UIL8 331 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 CLCA3PQ9Y6N3 262 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 A0A0G2JN53 185 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 A0A1B0GUH1 482 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 HMX2A2RU54 273 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 H0YIV9 168 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 MYO1DO94832 1006 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 IFNA16P05015 189 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 EPORP19235 508 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 CD22P20273 847 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 HIST1H1TP22492 207 aaPredicted RBP19.17■□□□□ 0.66
SNX13-206ENST00000474067 CERS1P27544 350 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 MAGEA12P43365 314 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 CYB561P49447 251 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 TUBA3CQ13748 450 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 OR1C1Q15619 314 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 TECRLQ5HYJ1 363 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 DEPDC1Q5TB30 811 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 TUBA3EQ6PEY2 450 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 F2RL3Q96RI0 385 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 MRPL57Q9BQC6 102 aaKnown RBP19.17■□□□□ 0.66
SNX13-206ENST00000474067 CDCP1Q9H5V8 836 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 IPPKQ9H8X2 491 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 WDR41Q9HAD4 459 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 NECTIN3Q9NQS3 549 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 PRDM7Q9NQW5 492 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 PNO1Q9NRX1 252 aaKnown RBP19.17■□□□□ 0.66
SNX13-206ENST00000474067 NTNG1Q9Y2I2 539 aa19.17■□□□□ 0.66
SNX13-206ENST00000474067 IQANK1A0A1B0GTG1 560 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 SCELO95171 688 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 CLDN9O95484 217 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 BUD31P41223 144 aaPredicted RBP19.16■□□□□ 0.66
SNX13-206ENST00000474067 CASP6P55212 293 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 C4orf17Q53FE4 359 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 OR4C11Q6IEV9 310 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 VN1R5Q7Z5H4 357 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 ACOT4Q8N9L9 421 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 EIF1ADQ8N9N8 165 aaKnown RBP19.16■□□□□ 0.66
SNX13-206ENST00000474067 FAM47BQ8NA70 645 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 OR14A16Q8NHC5 309 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 PELOQ9BRX2 385 aaKnown RBP19.16■□□□□ 0.66
SNX13-206ENST00000474067 MRPL46Q9H2W6 279 aaKnown RBP19.16■□□□□ 0.66
SNX13-206ENST00000474067 LRFN1Q9P244 771 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 FETUBQ9UGM5 382 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 PPT2Q9UMR5 302 aa19.16■□□□□ 0.66
SNX13-206ENST00000474067 PPIEQ9UNP9 301 aaKnown RBP19.16■□□□□ 0.66
SNX13-206ENST00000474067 C4orf51C9J302 202 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 FAM227AF5H4B4 570 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 DNAJB6O75190 326 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 ZFAND5O76080 213 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 TGFB1P01137 390 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 TAC1P20366 129 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 CPN2P22792 545 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 ATP5A1P25705 553 aaKnown RBP19.15■□□□□ 0.66
SNX13-206ENST00000474067 CCNG1P51959 295 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 SRSF1Q07955 248 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX13-206ENST00000474067 CUL3Q13618 768 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 DDX39BQ13838 428 aaKnown RBP19.15■□□□□ 0.66
SNX13-206ENST00000474067 MTFR2Q6P444 385 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 GOLGA7Q7Z5G4 137 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 GPALPP1Q8IXQ4 340 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 ARMC10Q8N2F6 343 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 ZCCHC7Q8N3Z6 543 aaKnown RBP19.15■□□□□ 0.66
SNX13-206ENST00000474067 MORN4Q8NDC4 146 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 HUS1BQ8NHY5 278 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 ART5Q96L15 291 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 PSMG3-AS1Q96PY0 264 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 AICDAQ9GZX7 198 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX13-206ENST00000474067 LYARQ9NX58 379 aaKnown RBP19.15■□□□□ 0.66
SNX13-206ENST00000474067 AHSPQ9NZD4 102 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 COPS7AQ9UBW8 275 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 NFU1Q9UMS0 254 aa19.15■□□□□ 0.66
SNX13-206ENST00000474067 RP1L1Q8IWN7 2480 aaPredicted RBP19.15■□□□□ 0.66
SNX13-206ENST00000474067 CNTRLQ7Z7A1 2325 aa19.14■□□□□ 0.66
SNX13-206ENST00000474067 TRIM49D1C9J1S8 452 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 FOXE1O00358 373 aaPredicted RBP19.14■□□□□ 0.65
SNX13-206ENST00000474067 CYR61O00622 381 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 E2F3O00716 465 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 PRAMEF4O60810 478 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 F10P00742 488 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 TNNI3P19429 210 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 ECHS1P30084 290 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 TRHRP34981 398 aaPredicted RBP19.14■□□□□ 0.65
SNX13-206ENST00000474067 CD96P40200 585 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 MLF1P58340 268 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 KRTCAP3Q53RY4 240 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 PRAMEF9Q5VWM5 478 aa19.14■□□□□ 0.65
SNX13-206ENST00000474067 ZNF324BQ6AW86 544 aaPredicted RBP19.14■□□□□ 0.65
SNX13-206ENST00000474067 FCRLBQ6BAA4 426 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms