RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SPATA4Q8NEY3 305 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 SUN3Q8TAQ9 357 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 AGAP11Q8TF27 550 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 PYROXD1Q8WU10 500 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ANKRD9Q96BM1 317 aaPredicted RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 PPWD1Q96BP3 646 aaKnown RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 LRRC39Q96DD0 335 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 DERL2Q9GZP9 239 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 OR51B5Q9H339 312 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ALG9Q9H6U8 611 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 TRIM45Q9H8W5 580 aaPredicted RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 DNAJC11Q9NVH1 559 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ZNF358Q9NW07 568 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 TEKT2Q9UIF3 430 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 MEMO1Q9Y316 297 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 AKAP6Q13023 2319 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ZNF407Q9C0G0 2248 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 GTF3C1Q12789 2109 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ZNF469Q96JG9 3925 aaPredicted RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 CLGNO14967 610 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 HNRNPRO43390 633 aaKnown RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 PEX1O43933 1283 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CCNT2O60583 730 aaKnown RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 ITGA10O75578 1167 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 STK16O75716 305 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 OR2J2O76002 312 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 TGFB1P01137 390 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CELA3AP09093 270 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 SLC35E2BP0CK96 405 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 MTHFD2P13995 350 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CD46P15529 392 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 GNAZP19086 355 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 IL10P22301 178 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 SOX3P41225 446 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CYB561P49447 251 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 RAB38P57729 211 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 POU4F1Q01851 419 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CHIT1Q13231 466 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 ART3Q13508 389 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 ZKSCAN8Q15776 578 aaPredicted RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 INAQ16352 499 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 IL20RBQ6UXL0 311 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CCDC25Q86WR0 208 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CCDC71Q8IV32 467 aaPredicted RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 CENPLQ8N0S6 344 aaPredicted RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 ARMC10Q8N2F6 343 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 SLC5A8Q8N695 610 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 PPM1NQ8N819 430 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 B3GNT7Q8NFL0 401 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 FBXO25Q8TCJ0 367 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 FBF1Q8TES7 1133 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 ZNF473Q8WTR7 871 aaKnown RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 ZDHHC16Q969W1 377 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 GAL3ST3Q96A11 431 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 NXNL1Q96CM4 212 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 DMRTA2Q96SC8 542 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 ATOH8Q96SQ7 321 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 GPR22Q99680 433 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 RBBP8Q99708 897 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 ALOXE3Q9BYJ1 711 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 TRIM8Q9BZR9 551 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 UCK2Q9BZX2 261 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 REXO4Q9GZR2 422 aaKnown RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 PRTFDC1Q9NRG1 225 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 WWOXQ9NZC7 414 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CD274Q9NZQ7 290 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 CORO1CQ9ULV4 474 aaPredicted RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 PPIEQ9UNP9 301 aaKnown RBP7.51□□□□□ -1.21
USP48-207ENST00000471752 PCDHGB6Q9Y5F9 930 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 LIPGQ9Y5X9 500 aa7.51□□□□□ -1.21
USP48-207ENST00000471752 A0A1B0GTL3 188 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 FAM166BA8MTA8 275 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 KDM4EB2RXH2 506 aaPredicted RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 CCDC188H7C350 402 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 PSMD12O00232 456 aaPredicted RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 PPP6CO00743 305 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 FGF17O60258 216 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 H2AFYO75367 372 aaKnown RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 EEDO75530 441 aaKnown RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 CLEC3AO75596 197 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 LRATO95237 230 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 CYC1P08574 325 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 ZNF24P17028 368 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 TFEBP19484 476 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 JAK1P23458 1154 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 ATP5A1P25705 553 aaKnown RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 MSH2P43246 934 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 MAGEA4P43358 317 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 PIK3CGP48736 1102 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 NEK2P51955 445 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 PER3P56645 1201 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 TAS2R50P59544 299 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 SLC13A2Q13183 592 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 SNTB1Q13884 538 aaKnown RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 C18orf63Q68DL7 685 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 TMEM64Q6YI46 380 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 CEP128Q6ZU80 1094 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 FRA10AC1Q70Z53 315 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 RPS27LQ71UM5 84 aaKnown RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 ADAMTSL2Q86TH1 951 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms