RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 OR5B12Q96R08 314 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FBRSL1Q9HCM7 1045 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RAB21Q9UL25 225 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF407Q9C0G0 2248 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SCN3AQ9NY46 2000 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 HNRNPDQ14103 355 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RAB30Q15771 203 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TMIGD1Q6UXZ0 262 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR6Q1Q8NGQ2 317 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TFAP2BQ92481 460 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TSACCQ96A04 125 aaPredicted RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PITX2Q99697 317 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GINS3Q9BRX5 216 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DEFB126Q9BYW3 111 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZFR2Q9UPR6 939 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FAM170BA6NMN3 283 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GPIP06744 558 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC6A4P31645 630 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RAB28P51157 221 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 UBE2NP61088 152 aaKnown RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LY6G5CQ5SRR4 150 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC44A3Q8N4M1 653 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CXorf21Q9HAI6 301 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 A0A087WUU8 490 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ANGPTL7O43827 346 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GLDCP23378 1020 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF84P51523 738 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SCAPQ12770 1279 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SYPL2Q5VXT5 272 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TMEM198Q66K66 360 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 USP43Q70EL4 1123 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PDSS2Q86YH6 399 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC15A3Q8IY34 581 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR4K1Q8NGD4 311 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CAMK1GQ96NX5 476 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC32A1Q9H598 525 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ITM2CQ9NQX7 267 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 WDR45Q9Y484 360 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ARVCFO00192 962 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PROM1O43490 865 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SCELO95171 688 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EDNRBP24530 442 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RPS3AP61247 264 aaKnown RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SPIN4Q56A73 249 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DENND1AQ8TEH3 1009 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ACDQ96AP0 544 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CACNA1GO43497 2377 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RCBTB2O95199 551 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TSHRP16473 764 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 AOC1P19801 751 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NTRK2Q16620 822 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RPS27LQ71UM5 84 aaKnown RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TMPRSS7Q7RTY8 843 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FAM86B1Q8N7N1 296 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 C12orf76Q8N812 135 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 S100A16Q96FQ6 103 aaKnown RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF395Q9H8N7 513 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZBTB20Q9HC78 741 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 POLE4Q9NR33 117 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF358Q9NW07 568 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 YIPF1Q9Y548 306 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PIK3C2BO00750 1634 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TRBC2A0A5B9 178 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF850A8MQ14 1090 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 XPNPEP2O43895 674 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FESP07332 822 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PFKLP17858 780 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF773Q6PK81 442 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TMCO2Q7Z6W1 182 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TAS2R10Q9NYW0 307 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TLR4O00206 839 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CRYZL1O95825 349 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RHCEP18577 417 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC15A1P46059 708 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 P2RX1P51575 399 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OLIG2Q13516 323 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 KANSL1Q7Z3B3 1105 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FBXL18Q96ME1 805 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 VSX1Q9NZR4 365 aaPredicted RBP12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FER1L5A0AVI2 2057 aa12.78□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EI24O14681 340 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PRPS1L1P21108 318 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PHTF2Q8N3S3 785 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PELOQ9BRX2 385 aaKnown RBP12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GATA5Q9BWX5 397 aaPredicted RBP12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 POLDIP3Q9BY77 421 aaKnown RBP12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TAS2R9Q9NYW1 312 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GALPQ9UBC7 116 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CHRFAM7AQ494W8 412 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TM9SF4Q92544 642 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PRTFDC1Q9NRG1 225 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms