RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 MC5RP33032 325 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 ACTN2P35609 894 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 MAGEA9P43362 315 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 RGS7P49802 495 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 HNRNPA3P51991 378 aaKnown RBP1.33□□□□□ -2.2
COMMD3-209ENST00000471350 MFAP3P55082 362 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 AGAP6Q5VW22 663 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 CST9LP1Q5W188 147 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 ANKRD33Q7Z3H0 272 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 UBQLNLQ8IYU4 475 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 ENTHD1Q8IYW4 607 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 ARL14Q8N4G2 192 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 NFAM1Q8NET5 270 aaPredicted RBP1.33□□□□□ -2.2
COMMD3-209ENST00000471350 VN1R17PQ8TDU5 208 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 LIPHQ8WWY8 451 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 EXT2Q93063 718 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 RMDN2Q96LZ7 410 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 RANBP9Q96S59 729 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 MTIF3Q9H2K0 278 aaKnown RBP1.33□□□□□ -2.2
COMMD3-209ENST00000471350 VIPAS39Q9H9C1 493 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 AMBNQ9NP70 447 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 PHPT1Q9NRX4 125 aaPredicted RBP1.33□□□□□ -2.2
COMMD3-209ENST00000471350 ABCG2Q9UNQ0 655 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 FAM169AQ9Y6X4 670 aa1.33□□□□□ -2.2
COMMD3-209ENST00000471350 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 EPOPA6NHQ4 379 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 NEDD8-MDP1E9PL57 170 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 PDXKO00764 312 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 GPAA1O43292 621 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 ADAM20O43506 726 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 PRAMEF12O95522 483 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 MOCS2O96007 188 aaPredicted RBP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 FYNP06241 537 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 ALOX5P09917 674 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 OR9G9P0C7N8 305 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 MYBL1P10243 752 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 KRT3P12035 628 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 NR2C1P13056 603 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 RPA1P27694 616 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 CDX1P47902 265 aaPredicted RBP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 P2RY4P51582 365 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 STX17P56962 302 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 CALD1Q05682 793 aaKnown RBP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 CETN1Q12798 172 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 CCL14Q16627 93 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 SPATA1Q5VX52 437 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 SUSD4Q5VX71 490 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 KRT80Q6KB66 452 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 RFWD3Q6PCD5 774 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 IGFL2Q6UWQ7 119 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 C2orf66Q6UXQ4 117 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 C11orf57Q6ZUT1 292 aaPredicted RBP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 SLC43A2Q8N370 569 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 OR13C5Q8NGS8 318 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 SETD7Q8WTS6 366 aaKnown RBP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 EXOC4Q96A65 974 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 FAF2Q96CS3 445 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 ZNF274Q96GC6 653 aaPredicted RBP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 LINC00615Q96LM1 132 aaPredicted RBP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 TSSK2Q96PF2 358 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 UBQLN3Q9H347 655 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 ABCC13Q9NSE7 274 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 MRGBPQ9NV56 204 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 BCCIPQ9P287 314 aaKnown RBP eCLIP1.32□□□□□ -2.2
COMMD3-209ENST00000471350 SNX7Q9UNH6 387 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 PASKQ96RG2 1323 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 TNRQ92752 1358 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 TRIOBPQ9H2D6 2365 aa1.32□□□□□ -2.2
COMMD3-209ENST00000471350 PINLYPA6NC86 204 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 FRG2CA6NGY1 282 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 CCT8L1PA6NM43 557 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 RNF212BA8MTL3 300 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 MCF2LO15068 1137 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 SPRY1O43609 319 aaPredicted RBP1.31□□□□□ -2.2
COMMD3-209ENST00000471350 GRAP2O75791 330 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 PSMD10O75832 226 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 STARD3NLO95772 234 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 LYNP07948 512 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 SP9P0CG40 484 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 SPP1P10451 314 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 DLATP10515 647 aaKnown RBP1.31□□□□□ -2.2
COMMD3-209ENST00000471350 NR2F1P10589 423 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 CALML3P27482 149 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 TNFRSF4P43489 277 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 RPP38P78345 283 aaKnown RBP1.31□□□□□ -2.2
COMMD3-209ENST00000471350 UGCGQ16739 394 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 PPP1R3AQ16821 1122 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 C9orf129Q5T035 196 aaKnown RBP1.31□□□□□ -2.2
COMMD3-209ENST00000471350 ZNF658Q5TYW1 1059 aaPredicted RBP1.31□□□□□ -2.2
COMMD3-209ENST00000471350 ALKBH5Q6P6C2 394 aaKnown RBP1.31□□□□□ -2.2
COMMD3-209ENST00000471350 C17orf107Q6ZR85 190 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 TMEM99Q8N816 258 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 Q8N9L7 120 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 NCOA7Q8NI08 942 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 C8orf46Q8TAG6 207 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 SMPDL3AQ92484 453 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 ELSPBP1Q96BH3 223 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 CDHR1Q96JP9 859 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 OR5M11Q96RB7 305 aa1.31□□□□□ -2.2
COMMD3-209ENST00000471350 CCT8L2Q96SF2 557 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms