RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CCL11P51671 97 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 HNRNPFP52597 415 aaKnown RBP18.58■□□□□ 0.56
HDAC7-220ENST00000471235 FOXA1P55317 472 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 BTG2P78543 158 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 ABRAXAS2Q15018 415 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 ANKRD37Q7Z713 158 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 ZCCHC7Q8N3Z6 543 aaKnown RBP18.58■□□□□ 0.56
HDAC7-220ENST00000471235 CLEC1AQ8NC01 280 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 METTL6Q8TCB7 284 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 SLC39A7Q92504 469 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 MAPKAP1Q9BPZ7 522 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 ZNF700Q9H0M5 742 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 STMN4Q9H169 189 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-220ENST00000471235 BRF2Q9HAW0 419 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 TMBIM4Q9HC24 238 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 ZNF160Q9HCG1 818 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 ARGLU1Q9NWB6 273 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-220ENST00000471235 KCMF1Q9P0J7 381 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 SLC12A4Q9UP95 1085 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 TIMM22Q9Y584 194 aa18.58■□□□□ 0.56
HDAC7-220ENST00000471235 COL6A6A6NMZ7 2263 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 IGKV3D-11A0A0A0MRZ8 115 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 A0A0A6YYD5 115 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 GOLGA6L10A6NI86 522 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 MKRN2OSH3BPM6 223 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 H3BQF6 201 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 BPGMP07738 259 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 MAOAP21397 527 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 CSTF3Q12996 717 aaKnown RBP18.57■□□□□ 0.56
HDAC7-220ENST00000471235 AIMP2Q13155 320 aaKnown RBP18.57■□□□□ 0.56
HDAC7-220ENST00000471235 ZCCHC23Q6ZST2 131 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 NDUFAF7Q7L592 441 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 CPEB2Q7Z5Q1 589 aaKnown RBP18.57■□□□□ 0.56
HDAC7-220ENST00000471235 NUDT13Q86X67 352 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 SCUBE1Q8IWY4 988 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 ABHD17AQ96GS6 310 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 PKNOX2Q96KN3 472 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 MRPL1Q9BYD6 325 aaKnown RBP18.57■□□□□ 0.56
HDAC7-220ENST00000471235 SHCBP1LQ9BZQ2 653 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 DDX31Q9H8H2 851 aaKnown RBP18.57■□□□□ 0.56
HDAC7-220ENST00000471235 PRDM9Q9NQV7 894 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 C19orf25Q9UFG5 118 aaPredicted RBP18.57■□□□□ 0.56
HDAC7-220ENST00000471235 MMACHCQ9Y4U1 282 aa18.57■□□□□ 0.56
HDAC7-220ENST00000471235 NSG1A0A0A6YYJ2 146 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 IGHV3-20A0A0C4DH32 117 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 A6NL46 340 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 CYR61O00622 381 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 TM9SF1O15321 606 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 TMPRSS11DO60235 418 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 NPHS1O60500 1241 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 PRMT3O60678 531 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 HSD3B1P14060 373 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 HSD3B2P26439 372 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 SERPINB4P48594 390 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 HNRNPH2P55795 449 aaKnown RBP18.56■□□□□ 0.56
HDAC7-220ENST00000471235 Q0VFX4 171 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 SLAMF1Q13291 335 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 MPP2Q14168 576 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 NSDHLQ15738 373 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 GALNT16Q8N428 558 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 EFCAB3Q8N7B9 438 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 FDCSPQ8NFU4 85 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 C9orf43Q8TAL5 461 aaPredicted RBP18.56■□□□□ 0.56
HDAC7-220ENST00000471235 TLCD1Q96CP7 247 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 CNDP1Q96KN2 507 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 PTCHD1Q96NR3 888 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 WDR77Q9BQA1 342 aaPredicted RBP18.56■□□□□ 0.56
HDAC7-220ENST00000471235 TRMOQ9BU70 441 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 ATP13A2Q9NQ11 1180 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 NECTIN3Q9NQS3 549 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 PRTFDC1Q9NRG1 225 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 RIC8BQ9NVN3 520 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 FBXW2Q9UKT8 454 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 MRPS33Q9Y291 106 aaKnown RBP18.56■□□□□ 0.56
HDAC7-220ENST00000471235 TP53TG5Q9Y2B4 290 aa18.56■□□□□ 0.56
HDAC7-220ENST00000471235 TGFBR3LH3BV60 316 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 ULK1O75385 1050 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 SEC24DO94855 1032 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-220ENST00000471235 ZWINTO95229 277 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 DHRS4L1P0CG22 281 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 CHN1P15882 459 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 NR1D1P20393 614 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 TNFRSF17Q02223 184 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 RAPSNQ13702 412 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 RCN2Q14257 317 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 SFT2D3Q587I9 215 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 MRM1Q6IN84 353 aaKnown RBP18.55■□□□□ 0.56
HDAC7-220ENST00000471235 CUZD1Q86UP6 607 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 PARP9Q8IXQ6 854 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 ZNF595Q8IYB9 648 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 METTL4Q8N3J2 472 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 SLC25A23Q9BV35 468 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 NUDT9Q9BW91 350 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 ACPTQ9BZG2 426 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 KCNK9Q9NPC2 374 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 LYARQ9NX58 379 aaKnown RBP18.55■□□□□ 0.56
HDAC7-220ENST00000471235 PHF11Q9UIL8 331 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 PCDHGA9Q9Y5G4 932 aaKnown RBP18.55■□□□□ 0.56
HDAC7-220ENST00000471235 CLDN16Q9Y5I7 305 aa18.55■□□□□ 0.56
HDAC7-220ENST00000471235 SPACA6W5XKT8 324 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms