RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 NSA2O95478 260 aaKnown RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ONECUT2O95948 504 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ZCCHC18P0CG32 403 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ZNF888P0CJ79 500 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 PIM1P11309 404 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 CCKBRP32239 447 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ARL4DP49703 201 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ARSFP54793 590 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 NME5P56597 212 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 BTN3A2P78410 334 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ART3Q13508 389 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 MLC1Q15049 377 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 CEBPEQ15744 281 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 MAPKAPK3Q16644 382 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 MMEL1Q495T6 779 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 SPANXN4Q5MJ08 99 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 LRIF1Q5T3J3 769 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 REP15Q6BDI9 236 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 PGM2L1Q6PCE3 622 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 DLEU7Q6UYE1 221 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 CACTIN-AS1Q8N1I8 211 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 AMER3Q8N944 861 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ZNF501Q96CX3 271 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 RCN3Q96D15 328 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 ITCHQ96J02 903 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 CCDC115Q96NT0 180 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 OR52E6Q96RD3 313 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 DUSP26Q9BV47 211 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 SORBS1Q9BX66 1292 aaKnown RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 EBPLQ9BY08 206 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 CADM1Q9BY67 442 aaKnown RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 SERHLQ9NQF3 203 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 SOHLH2Q9NX45 425 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 PHF11Q9UIL8 331 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 CES1P1Q9UKY3 287 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 PRPF19Q9UMS4 504 aaKnown RBP12.08□□□□□ -0.48
TRAF4-208ENST00000469529 DAPP1Q9UN19 280 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 TMEM131Q92545 1883 aa12.08□□□□□ -0.48
TRAF4-208ENST00000469529 DNAH14Q0VDD8 3507 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 A0A096LPI6 279 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 TRBV5-3A0A0A0MS03 114 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 A0A1W2PR48 441 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 FOXS1O43638 330 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 B3GALT2O43825 422 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 DKK1O94907 266 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 GBAP04062 536 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 EIF2S1P05198 315 aaKnown RBP12.07□□□□□ -0.48
TRAF4-208ENST00000469529 IL3P08700 152 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 LAMP1P11279 417 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 COX7A2P14406 83 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 FOLR1P15328 257 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 ITGAXP20702 1163 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 PTPN6P29350 595 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 DGKQP52824 942 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 RAB8AP61006 207 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 DMTNQ08495 405 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 RUNX2Q13950 521 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 PAGE3Q5JUK9 113 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 CYB5D1Q6P9G0 228 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 SAMD14Q8IZD0 417 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-208ENST00000469529 TTC29Q8NA56 475 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-208ENST00000469529 FAM47BQ8NA70 645 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 C7orf57Q8NEG2 295 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 CLHC1Q8NHS4 586 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 FBXO27Q8NI29 283 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 ADAMTS18Q8TE60 1221 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 VPS33AQ96AX1 596 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 PPCDCQ96CD2 204 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 LRRC58Q96CX6 371 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 COPS7BQ9H9Q2 264 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-208ENST00000469529 ANKHQ9HCJ1 492 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 PRM3Q9NNZ6 103 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 ACSS1Q9NUB1 689 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-208ENST00000469529 SIDT1Q9NXL6 827 aaKnown RBP12.07□□□□□ -0.48
TRAF4-208ENST00000469529 CROTQ9UKG9 612 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 PSME2Q9UL46 239 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 ATXN7L1Q9ULK2 861 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-208ENST00000469529 AP3M1Q9Y2T2 418 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 ATG4BQ9Y4P1 393 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 SPTBN2O15020 2390 aa12.07□□□□□ -0.48
TRAF4-208ENST00000469529 GOLGA4Q13439 2230 aaKnown RBP12.06□□□□□ -0.48
TRAF4-208ENST00000469529 C15orf38-AP3S2A0A0A6YYH1 394 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 FXYD1O00168 92 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 CYR61O00622 381 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 AKAP10O43572 662 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 OR2B3O76000 313 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 ADRB1P08588 477 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 HOXB9P17482 250 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-208ENST00000469529 IL10P22301 178 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 TLX1P31314 330 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-208ENST00000469529 CPA2P48052 419 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-208ENST00000469529 NUDT2P50583 147 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 LIM2P55344 173 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 ITGA1P56199 1179 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 PCBP4P57723 403 aaKnown RBP12.06□□□□□ -0.48
TRAF4-208ENST00000469529 SLC25A3Q00325 362 aa12.06□□□□□ -0.48
TRAF4-208ENST00000469529 BIKQ13323 160 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms