RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TAPBPO15533 448 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 ZFAND5O76080 213 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 PDE9AO76083 593 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 TBX6O95947 436 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-207ENST00000467819 IFNA16P05015 189 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 RPL21P46778 160 aaKnown RBP19.6■□□□□ 0.73
COL9A3-207ENST00000467819 HSPA7P48741 367 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 GPR143P51810 404 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 POU4F1Q01851 419 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 GPSM1Q86YR5 675 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 TCAIMQ8N3R3 496 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 ZFP62Q8NB50 900 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-207ENST00000467819 C16orf52Q8NHV5 167 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 SERINC2Q96SA4 455 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 MCMBPQ9BTE3 642 aa19.6■□□□□ 0.73
COL9A3-207ENST00000467819 YARS2Q9Y2Z4 477 aaKnown RBP19.6■□□□□ 0.73
COL9A3-207ENST00000467819 A8MVJ9 347 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 PHGDHO43175 533 aaKnown RBP19.59■□□□□ 0.73
COL9A3-207ENST00000467819 PRAMEF4O60810 478 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 OR2J2O76002 312 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 TUBB4AP04350 444 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 CCDC166P0CW27 439 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 HPDP32754 393 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-207ENST00000467819 MTTPP55157 894 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 LIM2P55344 173 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 GNG11P61952 73 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 BMPR2Q13873 1038 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 ELAVL1Q15717 326 aaKnown RBP19.59■□□□□ 0.73
COL9A3-207ENST00000467819 ADPRMQ3LIE5 342 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 XKR6Q5GH73 641 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 PRAMEF9Q5VWM5 478 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 ABHD17CQ6PCB6 329 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 IL20RBQ6UXL0 311 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 CEP128Q6ZU80 1094 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 TMEM132CQ8N3T6 1108 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 PSD4Q8NDX1 1056 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 OR52N2Q8NGI0 321 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 ASB15Q8WXK1 588 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 SEC16BQ96JE7 1060 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 PITHD1Q9GZP4 211 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-207ENST00000467819 CNOT10Q9H9A5 744 aaKnown RBP19.59■□□□□ 0.73
COL9A3-207ENST00000467819 PRM3Q9NNZ6 103 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 DEPPQ9NTK1 212 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 HPF1Q9NWY4 346 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 ZNF490Q9ULM2 529 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-207ENST00000467819 DAPP1Q9UN19 280 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 SAR1BQ9Y6B6 198 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 CLCA3PQ9Y6N3 262 aa19.59■□□□□ 0.73
COL9A3-207ENST00000467819 TMEM200CA6NKL6 621 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 CXorf49A8MYA2 514 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-207ENST00000467819 CCDC188H7C350 402 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 CYR61O00622 381 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 OR6B1O95007 311 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 WISP3O95389 354 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-207ENST00000467819 SSTR1P30872 391 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 NR0B1P51843 470 aaKnown RBP19.58■□□□□ 0.72
COL9A3-207ENST00000467819 KRTAP10-9P60411 292 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 MRPS25P82663 173 aaKnown RBP19.58■□□□□ 0.72
COL9A3-207ENST00000467819 DOC2AQ14183 400 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 OR4D1Q15615 310 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 MEX3BQ6ZN04 569 aaKnown RBP19.58■□□□□ 0.72
COL9A3-207ENST00000467819 MARVELD2Q8N4S9 558 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 PYROXD1Q8WU10 500 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 CHTF18Q8WVB6 975 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 EXT2Q93063 718 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 TSPAN17Q96FV3 270 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 F2RL3Q96RI0 385 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 KRT12Q99456 494 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 NAPGQ99747 312 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-207ENST00000467819 SPOCK3Q9BQ16 436 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 DEFB127Q9H1M4 99 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 EHD1Q9H4M9 534 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 CD274Q9NZQ7 290 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 TXNDC16Q9P2K2 825 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 HRH3Q9Y5N1 445 aa19.58■□□□□ 0.72
COL9A3-207ENST00000467819 PINLYPA6NC86 204 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 FAM166BA8MTA8 275 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 WWP2O00308 870 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 STK16O75716 305 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 CD22P20273 847 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 GGT5P36269 586 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 SOX3P41225 446 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 PAFAH1B1P43034 410 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 PLGLB1Q02325 96 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 RCN2Q14257 317 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 PDK4Q16654 411 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 SULT1C3Q6IMI6 304 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 HSDL2Q6YN16 418 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 PTCD3Q96EY7 689 aaKnown RBP19.57■□□□□ 0.72
COL9A3-207ENST00000467819 SAYSD1Q9NPB0 183 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 MYOTQ9UBF9 498 aa19.57■□□□□ 0.72
COL9A3-207ENST00000467819 HIVEP1P15822 2718 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 A0A0G2JMM0 328 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 A0A1W2PPB8 328 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 A0A1W2PRS3 328 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 KIR3DP1A8MWS1 328 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 G3V3Y1 287 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 CCNT2O60583 730 aaKnown RBP19.56■□□□□ 0.72
COL9A3-207ENST00000467819 CTNSO60931 367 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 CD1DP15813 335 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms