RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 EFCAB7A8K855 629 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SEMA3DO95025 777 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CDK4P11802 303 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CCL4P13236 92 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 LBPP18428 481 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 DIO3P55073 304 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ITGA1P56199 1179 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ERVK-8P63133 956 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ACY1Q03154 408 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 PRTGQ2VWP7 1150 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 TMEM35AQ53FP2 167 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 MANEAQ5SRI9 462 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 TRIM40Q6P9F5 258 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ABHD17CQ6PCB6 329 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF793Q6ZN11 406 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 PRSS41Q7RTY9 318 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ZFAND4Q86XD8 727 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 TMEM151BQ8IW70 566 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 GPR135Q8IZ08 494 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 METTL4Q8N3J2 472 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ARHGEF39Q8N4T4 335 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 DTWD1Q8N5C7 304 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 UTP15Q8TED0 518 aaKnown RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 STON2Q8WXE9 905 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 GAL3ST3Q96A11 431 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 RGMAQ96B86 450 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 KCNC2Q96PR1 638 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CMKLR1Q99788 373 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 EBPLQ9BY08 206 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 NLNQ9BYT8 704 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 HEY2Q9UBP5 337 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 DLGAP4Q9Y2H0 992 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 LOC105371267A0A1B0GV96 52 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 URADA6NGE7 173 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 TXNDC9O14530 226 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CSO75390 466 aaKnown RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF254O75437 659 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 KCNK5O95279 499 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 OXSR1O95747 527 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 IL1RNP18510 177 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ITIH1P19827 911 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 NCF2P19878 526 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 PRKACBP22694 351 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 BSGP35613 385 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SSR2P43308 183 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 RAE1P78406 368 aaKnown RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 EMX2Q04743 252 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 BNIP1Q12981 228 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 RSPO4Q2I0M5 234 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 DEFB134Q4QY38 66 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 OGFOD2Q6N063 350 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 NOXRED1Q6NXP6 359 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 RIPOR1Q6ZS17 1223 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ABHD13Q7L211 337 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 BMPERQ8N8U9 685 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 AMER3Q8N944 861 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SGCDQ92629 289 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 RNF31Q96EP0 1072 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 C10orf90Q96M02 699 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 GBP5Q96PP8 586 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 DEPDC7Q96QD5 511 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 TEFMQ96QE5 360 aaKnown RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CCDC28BQ9BUN5 200 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 STRADBQ9C0K7 418 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SERTAD3Q9UJW9 196 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ARL2BPQ9Y2Y0 163 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 AKAP13Q12802 2813 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 GNG14A0A1W2PPG7 69 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 FITM1A5D6W6 292 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 UBDO15205 165 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 EEDO75530 441 aaKnown RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 MED26O95402 600 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 TIAF1O95411 115 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 KLK1P06870 262 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SMIM10L1P0DMW3 83 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 ALOX12P18054 663 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CERS1P27544 350 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 TIA1P31483 386 aaKnown RBP eCLIP6.51□□□□□ -1.377e-7■■■□□ 16.9
SCAF4-204ENST00000467731 HPCAP84074 193 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 MAD2L1Q13257 205 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 GRM7Q14831 915 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 PTGR1Q14914 329 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 IL23RQ5VWK5 629 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 FOXB2Q5VYV0 432 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 OR4C11Q6IEV9 310 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 GALNT18Q6P9A2 607 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 RAB11FIP2Q7L804 512 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 NUDT13Q86X67 352 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 PPP1R3BQ86XI6 285 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CCDC197Q8NCU1 140 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SRFBP1Q8NEF9 429 aaKnown RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 OR8K5Q8NH50 307 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 LIN37Q96GY3 246 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SMIM10Q96HG1 83 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 METTL2AQ96IZ6 378 aaKnown RBP6.51□□□□□ -1.37
SCAF4-204ENST00000467731 CTRCQ99895 268 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 NMUR2Q9GZQ4 415 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 PRDM7Q9NQW5 492 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 AHSPQ9NZD4 102 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 RARRES3Q9UL19 164 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms