RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 ZNF195O14628 629 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 HAT1O14929 419 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 PRAMEF4O60810 478 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 SEC22BO75396 215 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 ATP6AP2O75787 350 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 MYO1DO94832 1006 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 CBX6O95503 412 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 MSL3P1P0C860 447 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 LBPP18428 481 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 NCF2P19878 526 aaPredicted RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 PTX3P26022 381 aaPredicted RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 MAPK1P28482 360 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 AHRP35869 848 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 PIK3CBP42338 1070 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 HTR6P50406 440 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 RRADP55042 308 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 YBX1P67809 324 aaKnown RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 ATP1A4Q13733 1029 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 LSM12Q3MHD2 195 aaKnown RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 ZC3H12BQ5HYM0 836 aaKnown RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 PRAMEF9Q5VWM5 478 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 RNF165Q6ZSG1 346 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 CHSY3Q70JA7 882 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 PAQR7Q86WK9 346 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 C19orf47Q8N9M1 422 aaKnown RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 TRPV3Q8NET8 790 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 HUS1BQ8NHY5 278 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 WDR20Q8TBZ3 569 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 ACTRT2Q8TDY3 377 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 STON2Q8WXE9 905 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 RERGQ96A58 199 aaPredicted RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 SNRNP40Q96DI7 357 aaKnown RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 THAP11Q96EK4 314 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 HBEGFQ99075 208 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 SERPINI1Q99574 410 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 SPNS1Q9H2V7 528 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 WDR55Q9H6Y2 383 aaPredicted RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 FANCEQ9HB96 536 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 FARSBQ9NSD9 589 aaKnown RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 MRGBPQ9NV56 204 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 AHSPQ9NZD4 102 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.52□□□□□ -0.73
GAPDH-207ENST00000466588 C5AR2Q9P296 337 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 HEY2Q9UBP5 337 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 KLHL20Q9Y2M5 609 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 TSC22D4Q9Y3Q8 395 aa10.52□□□□□ -0.73
GAPDH-207ENST00000466588 MDC1Q14676 2089 aaKnown RBP10.51□□□□□ -0.73
GAPDH-207ENST00000466588 FBN2P35556 2912 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 IGKV1-8A0A0C4DH67 115 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 A0A0J9YVX5 310 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 SERTM1A2A2V5 107 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 URADA6NGE7 173 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 SLC9B1P1A6NJY1 282 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 A6NL46 340 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 E9PBE3 544 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 FOXE1O00358 373 aaPredicted RBP10.51□□□□□ -0.73
GAPDH-207ENST00000466588 UBDO15205 165 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 KLHL41O60662 606 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 PEX11AO75192 247 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 RSL1D1O76021 490 aaKnown RBP10.51□□□□□ -0.73
GAPDH-207ENST00000466588 JUNP05412 331 aaKnown RBP10.51□□□□□ -0.73
GAPDH-207ENST00000466588 SLC35G6P0C7Q6 338 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 PVRP15151 417 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 SCTRP47872 440 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 RAP1GDS1P52306 607 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 STX1BP61266 288 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 RPS13P62277 151 aaKnown RBP10.51□□□□□ -0.73
GAPDH-207ENST00000466588 RGS1Q08116 209 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 RAPSNQ13702 412 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 NCF4Q15080 339 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 RPS6KA2Q15349 733 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 METTL21CQ5VZV1 264 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 ZNF425Q6IV72 752 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 MAVSQ7Z434 540 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 TRIM46Q7Z4K8 759 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 PLD3Q8IV08 490 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 PARP9Q8IXQ6 854 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.51□□□□□ -0.736e-8■■■■□ 20.7
GAPDH-207ENST00000466588 FNDC5Q8NAU1 212 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 MFSD9Q8NBP5 474 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 ZNF740Q8NDX6 193 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 OR1L3Q8NH93 324 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 FLVCR1-AS1Q8TAF5 88 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 CLIP3Q96DZ5 547 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 CMTM7Q96FZ5 175 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 TRAPPC9Q96Q05 1148 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 ZFYVE21Q9BQ24 234 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 KLHL25Q9H0H3 589 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 RHBGQ9H310 441 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 TUBB1Q9H4B7 451 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 AKTIPQ9H8T0 292 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 ACTR5Q9H9F9 607 aaPredicted RBP10.51□□□□□ -0.73
GAPDH-207ENST00000466588 LRTM1Q9HBL6 345 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 ASF1BQ9NVP2 202 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 VPS29Q9UBQ0 182 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 ZFP69BQ9UJL9 534 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 EIF3LQ9Y262 564 aaKnown RBP10.51□□□□□ -0.73
GAPDH-207ENST00000466588 SLC5A6Q9Y289 635 aa10.51□□□□□ -0.73
GAPDH-207ENST00000466588 HIVEP3Q5T1R4 2406 aa10.5□□□□□ -0.73
GAPDH-207ENST00000466588 APCP25054 2843 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms