RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 NEK2P51955 445 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PGDP52209 483 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 AP2B1P63010 937 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 EEF1A2Q05639 463 aaKnown RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 IFT88Q13099 833 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 DDX39BQ13838 428 aaKnown RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 RCN2Q14257 317 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PCLAFQ15004 111 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ABRAXAS2Q15018 415 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 TERF2Q15554 542 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 NSDHLQ15738 373 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 AP5B1Q2VPB7 878 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 KRT71Q3SY84 523 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 LIPMQ5VYY2 423 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PLAG1Q6DJT9 500 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 JMJD6Q6NYC1 403 aaPredicted RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 LANCL3Q6ZV70 420 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 GPRIN3Q6ZVF9 776 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 CROCCP2Q86T23 111 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 MYLK4Q86YV6 388 aaPredicted RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 KBTBD2Q8IY47 623 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF595Q8IYB9 648 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 TMEM52Q8NDY8 209 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PPP4R1Q8TF05 950 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 AGAP11Q8TF27 550 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PSMF1Q92530 271 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 TSLPQ969D9 159 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PGM2Q96G03 612 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZIM3Q96PE6 472 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 CENPKQ9BS16 269 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 LHPPQ9H008 270 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 C12orf65Q9H3J6 166 aaKnown RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 COPS7BQ9H9Q2 264 aaPredicted RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF160Q9HCG1 818 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 NECTIN3Q9NQS3 549 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ADAM29Q9UKF5 820 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 SNX6Q9UNH7 406 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PPIEQ9UNP9 301 aaKnown RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF451Q9Y4E5 1061 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ASB4Q9Y574 426 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ACTL7BQ9Y614 415 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 EIF4E1BA6NMX2 242 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 TGFBR3LH3BV60 316 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 MANBAO00462 879 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 UBFD1O14562 309 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 CTIFO43310 598 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 SUV39H1O43463 412 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 B4GALT2O60909 372 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 CTNSO60931 367 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 ERLIN1O75477 346 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 EEDO75530 441 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 CDC123O75794 336 aaPredicted RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 OR4F21O95013 312 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 PDYNP01213 254 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 PRR35P0CG20 571 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 CREB1P16220 341 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 TSPAN8P19075 237 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 NR1D1P20393 614 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 ETV4P43268 484 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 SSR2P43308 183 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 RAP1GDS1P52306 607 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 HNRNPFP52597 415 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 NAGLUP54802 743 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 BTG2P78543 158 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 IGLV3-21P80748 117 aaPredicted RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 C19orf57Q0VDD7 668 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 TBL3Q12788 808 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 CSTF3Q12996 717 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 EXT1Q16394 746 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 SFT2D3Q587I9 215 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 FAAH2Q6GMR7 532 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 H3F3CQ6NXT2 135 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 RNF165Q6ZSG1 346 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 ASB18Q6ZVZ8 466 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 EXOC3L1Q86VI1 746 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 C10orf107Q8IVU9 208 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 METTL4Q8N3J2 472 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 C7orf57Q8NEG2 295 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 ARMC2Q8NEN0 867 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 OR6Y1Q8NGX8 325 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 M1APQ8TC57 530 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 TCP10LQ8TDR4 215 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 PTCHD1Q96NR3 888 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 LMF1Q96S06 567 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 SMC6Q96SB8 1091 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 CSF3RQ99062 836 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 MAPKAP1Q9BPZ7 522 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 TRMOQ9BU70 441 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 ELOVL6Q9H5J4 265 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 MMP25Q9NPA2 562 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 ZNF71Q9NQZ8 489 aaPredicted RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 FARSBQ9NSD9 589 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 LYARQ9NX58 379 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 MS4A12Q9NXJ0 267 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 ANAPC2Q9UJX6 822 aa8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 G3BP2Q9UN86 482 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 MRPS33Q9Y291 106 aaKnown RBP8.89□□□□□ -0.99
SDCCAG3-208ENST00000466579 A6NL46 340 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 NPIPB8E9PQR5 432 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms