RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 MAP3K3Q99759 626 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 SH3GL1Q99961 368 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 HOPXQ9BPY8 73 aaPredicted RBP5.72□□□□□ -1.49
CHMP3-206ENST00000466032 C17orf62Q9BQA9 187 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 B3GNT4Q9C0J1 378 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 BHLHE41Q9C0J9 482 aaPredicted RBP5.72□□□□□ -1.49
CHMP3-206ENST00000466032 STRADBQ9C0K7 418 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 ZNF385DQ9H6B1 395 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 LYRM4Q9HD34 91 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 MYNNQ9NPC7 610 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 ACSS2Q9NR19 701 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 FAM120CQ9NX05 1096 aaKnown RBP5.72□□□□□ -1.49
CHMP3-206ENST00000466032 TAS2R7Q9NYW3 318 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 BCAP29Q9UHQ4 241 aa5.72□□□□□ -1.49
CHMP3-206ENST00000466032 LEF1Q9UJU2 399 aaPredicted RBP5.72□□□□□ -1.49
CHMP3-206ENST00000466032 MRPS33Q9Y291 106 aaKnown RBP5.72□□□□□ -1.49
CHMP3-206ENST00000466032 PRAMEF33A0A0G2JMD5 474 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 A0A0J9YVX5 310 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 C1orf226A1L170 272 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 KRT87PA6NCN2 255 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CCDC154A6NI56 674 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 SLC9B1P1A6NJY1 282 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 H0YGG7 62 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 H0YIG0 161 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CDX4O14627 284 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PCDH17O14917 1159 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ANGPT2O15123 496 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ERI3O43414 337 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 B3GALT2O43825 422 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 LCMT2O60294 686 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 NRP2O60462 931 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 DNAJA2O60884 412 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ERN1O75460 977 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 NSA2O95478 260 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 RPLP0P05388 317 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 JUNP05412 331 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 SERPIND1P05546 499 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 IFI6P09912 130 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ALDOCP09972 364 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 SMIM10L1P0DMW3 83 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 G6PDP11413 515 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 COX4I1P13073 169 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CD59P13987 128 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ST6GAL1P15907 406 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ACADSP16219 412 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 GPX3P22352 226 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 HIST1H1TP22492 207 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PPIBP23284 216 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PIK3R1P27986 724 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PTPN4P29074 926 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 TPP2P29144 1249 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CCKBRP32239 447 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CSTF2P33240 577 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 S100A3P33764 101 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 BSGP35613 385 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 KIR3DL1P43629 444 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 TRPC1P48995 793 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ITGA1P56199 1179 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ARF3P61204 181 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ELF3P78545 371 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 MEF2AQ02078 507 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ART3Q13508 389 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 MAP7Q14244 749 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PRTGQ2VWP7 1150 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 AMZ1Q400G9 498 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 AGKQ53H12 422 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 TCHHL1Q5QJ38 904 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 TMEM214Q6NUQ4 689 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 GUSBP11Q6P575 273 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 BHLHB9Q6PI77 547 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 RBM44Q6ZP01 1051 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 GPR180Q86V85 440 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CCDC116Q8IYX3 515 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 LIX1Q8N485 282 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 DPP10Q8N608 796 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 C1orf52Q8N6N3 182 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CSNK1A1LQ8N752 337 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 TRIML2Q8N7C3 387 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ZNF740Q8NDX6 193 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PRSS33Q8NF86 280 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ZFP28Q8NHY6 868 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PROKR1Q8TCW9 393 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ZBED6CLQ96FA7 236 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 APIPQ96GX9 242 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 SMIM10Q96HG1 83 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 PPP1R36Q96LQ0 422 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 TEFMQ96QE5 360 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 RAB3IPQ96QF0 476 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CMKLR1Q99788 373 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 DPH2Q9BQC3 489 aaPredicted RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 NDC1Q9BTX1 674 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 RAD21L1Q9H4I0 556 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 CLMPQ9H6B4 373 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 REEP4Q9H6H4 257 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 IL21RQ9HBE5 538 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 ANKHQ9HCJ1 492 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 NEUROD4Q9HD90 331 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 MIEF1Q9NQG6 463 aa5.71□□□□□ -1.5
CHMP3-206ENST00000466032 FARSBQ9NSD9 589 aaKnown RBP5.71□□□□□ -1.5
CHMP3-206ENST00000466032 GIMAP4Q9NUV9 329 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms