RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SYNDIG1LA6NDD5 238 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 HCN1O60741 890 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 IFNA16P05015 189 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 HEXAP06865 529 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 CELA3AP09093 270 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 BMP5P22003 454 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 PPP2R1BP30154 601 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 SLC1A2P43004 574 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 ASCL1P50553 236 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 BTN3A2P78410 334 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 DHX9Q08211 1270 aaKnown RBP13.4□□□□□ -0.26
SMC1A-204ENST00000463684 HYAL4Q2M3T9 481 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 TOR1AIP1Q5JTV8 583 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 CHSY3Q70JA7 882 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 SCUBE1Q8IWY4 988 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 GOLM1Q8NBJ4 401 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 SLC5A11Q8WWX8 675 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 ATL1Q8WXF7 558 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 NEIL2Q969S2 332 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 ARSGQ96EG1 525 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 SCYL1Q96KG9 808 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 SGCZQ96LD1 299 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 OR4K3Q96R72 315 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 AIF1LQ9BQI0 150 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 ZNF395Q9H8N7 513 aaPredicted RBP13.4□□□□□ -0.26
SMC1A-204ENST00000463684 ADAP2Q9NPF8 381 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 C20orf96Q9NUD7 363 aaPredicted RBP13.4□□□□□ -0.26
SMC1A-204ENST00000463684 TAS2R13Q9NYV9 303 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 MTRF1LQ9UGC7 380 aaKnown RBP13.4□□□□□ -0.26
SMC1A-204ENST00000463684 FBXO5Q9UKT4 447 aa13.4□□□□□ -0.26
SMC1A-204ENST00000463684 MRPS33Q9Y291 106 aaKnown RBP13.4□□□□□ -0.26
SMC1A-204ENST00000463684 VPS13CQ709C8 3753 aa13.4□□□□□ -0.27
SMC1A-204ENST00000463684 TUBAL3A6NHL2 446 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 SDR42E2A6NKP2 422 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 SERPINA6P08185 405 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 EPXP11678 715 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 SAT1P21673 171 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 TACR1P25103 407 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 DNASE1L1P49184 302 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 AP1S2P56377 157 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
SMC1A-204ENST00000463684 OPN5Q6U736 354 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 FBXW8Q8N3Y1 598 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 ANKRD53Q8N9V6 530 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
SMC1A-204ENST00000463684 DAZLQ92904 295 aaKnown RBP13.39□□□□□ -0.27
SMC1A-204ENST00000463684 TSNARE1Q96NA8 513 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 MDFIQ99750 246 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 SH3GL2Q99962 352 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 NPLQ9BXD5 320 aaPredicted RBP13.39□□□□□ -0.27
SMC1A-204ENST00000463684 SPNS1Q9H2V7 528 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
SMC1A-204ENST00000463684 DYRK1BQ9Y463 629 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 PCDHGB3Q9Y5G1 929 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
SMC1A-204ENST00000463684 ZCWPW2A0A1B0GU75 182 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 PTMSP20962 102 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 KCNJ1P48048 391 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 HK2P52789 917 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 STXBP1P61764 594 aaKnown RBP13.38□□□□□ -0.27
SMC1A-204ENST00000463684 NKX6-1P78426 367 aaPredicted RBP13.38□□□□□ -0.27
SMC1A-204ENST00000463684 CCZ1BP86790 482 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 CCZ1P86791 482 aaPredicted RBP13.38□□□□□ -0.27
SMC1A-204ENST00000463684 REEP5Q00765 189 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 FOXO1Q12778 655 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 RUNX2Q13950 521 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 SHEQ5VZ18 495 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 PAQR3Q6TCH7 311 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 KIF18BQ86Y91 864 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 ZNF595Q8IYB9 648 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 ULK2Q8IYT8 1036 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 RELL2Q8NC24 303 aaPredicted RBP13.38□□□□□ -0.27
SMC1A-204ENST00000463684 MORN4Q8NDC4 146 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 OR5L2Q8NGL0 311 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 MAIP1Q8WWC4 291 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 FBXL8Q96CD0 374 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 LINGO1Q96FE5 620 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 NDNQ99608 321 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 PELI2Q9HAT8 420 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 ZNF629Q9UEG4 869 aaPredicted RBP13.38□□□□□ -0.27
SMC1A-204ENST00000463684 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
SMC1A-204ENST00000463684 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.38□□□□□ -0.27
SMC1A-204ENST00000463684 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
SMC1A-204ENST00000463684 A0A088AWK7 358 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 ARHGEF9O43307 516 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 NRDCO43847 1150 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 GUCA1CO95843 209 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 MLNP12872 115 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 TNNI3P19429 210 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 ZNF10P21506 573 aaPredicted RBP13.37□□□□□ -0.27
SMC1A-204ENST00000463684 RAB38P57729 211 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 IL2P60568 153 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 DCAF7P61962 342 aa13.37□□□□□ -0.27
SMC1A-204ENST00000463684 PCBP2Q15366 365 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMC1A-204ENST00000463684 SIX1Q15475 284 aaPredicted RBP13.37□□□□□ -0.27
SMC1A-204ENST00000463684 TRIP13Q15645 432 aaPredicted RBP13.37□□□□□ -0.27
SMC1A-204ENST00000463684 FBXL19-AS1Q494R0 122 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms