RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 MASP2O00187 686 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 CLDN4O14493 209 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 PLPP1O14494 284 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 DPM1O60762 260 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 B4GALT2O60909 372 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 OR4F21O95013 312 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 ALPPP05187 535 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 PRR35P0CG20 571 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 HSD3B1P14060 373 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 HSD3B2P26439 372 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 CERS1P27544 350 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 NEK2P51955 445 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 BTG2P78543 158 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 ZNF844Q08AG5 666 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 KLRB1Q12918 225 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 NFATC3Q12968 1075 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 LCP2Q13094 533 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 IFT88Q13099 833 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 DDX39BQ13838 428 aaKnown RBP11.35□□□□□ -0.59
HPS1-206ENST00000462743 ABRAXAS2Q15018 415 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 PLAG1Q6DJT9 500 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 FAAH2Q6GMR7 532 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 LETMD1Q6P1Q0 360 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 LRIG3Q6UXM1 1119 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 LANCL3Q6ZV70 420 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 GPRIN3Q6ZVF9 776 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 RPS27LQ71UM5 84 aaKnown RBP11.35□□□□□ -0.59
HPS1-206ENST00000462743 SCUBE1Q8IWY4 988 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 RNF175Q8N4F7 328 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 ARMC2Q8NEN0 867 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 M1APQ8TC57 530 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 COPS7BQ9H9Q2 264 aaPredicted RBP11.35□□□□□ -0.59
HPS1-206ENST00000462743 ZNF160Q9HCG1 818 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 PRTFDC1Q9NRG1 225 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 NMRK1Q9NWW6 199 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 AHSPQ9NZD4 102 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 SNX6Q9UNH7 406 aa11.35□□□□□ -0.59
HPS1-206ENST00000462743 PPIEQ9UNP9 301 aaKnown RBP11.35□□□□□ -0.59
HPS1-206ENST00000462743 RTCAO00442 366 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 CDK2AP1O14519 115 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 TYROBPO43914 113 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 TRIM13O60858 407 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 ERLIN1O75477 346 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 ETHE1O95571 254 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 ESRRBO95718 433 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 KRT6AP02538 564 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 KRT6BP04259 564 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 ENO1P06733 434 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 TSPAN8P19075 237 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 ITGA3P26006 1051 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 SOX11P35716 441 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 KRT6CP48668 564 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 NAGLUP54802 743 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 OR4D2P58180 307 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 EEF1A2Q05639 463 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 SLAMF1Q13291 335 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 TERF2Q15554 542 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 EXT1Q16394 746 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 KRT71Q3SY84 523 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 SFT2D3Q587I9 215 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 BEND6Q5SZJ8 279 aaPredicted RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 MFSD4BQ5TF39 518 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 AGAP7PQ5VUJ5 663 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 IRAK1BP1Q5VVH5 260 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 LIPMQ5VYY2 423 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 TTC19Q6DKK2 380 aaPredicted RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 ISLR2Q6UXK2 745 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 SRRM1Q8IYB3 904 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 METTL4Q8N3J2 472 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 RBMXL3Q8N7X1 1067 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 TEX19Q8NA77 164 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 TSLPQ969D9 159 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 THOC3Q96J01 351 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 AGAP4Q96P64 663 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 LPAR4Q99677 370 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 MAPKAP1Q9BPZ7 522 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 C12orf65Q9H3J6 166 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 ELOVL6Q9H5J4 265 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 SSU72Q9NP77 194 aaKnown RBP11.34□□□□□ -0.59
HPS1-206ENST00000462743 MMP25Q9NPA2 562 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 NECTIN3Q9NQS3 549 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 VTI1BQ9UEU0 232 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 ASB4Q9Y574 426 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 SPACA6W5XKT8 324 aa11.34□□□□□ -0.59
HPS1-206ENST00000462743 SMG1Q96Q15 3661 aaKnown RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 A0A0A6YYD5 115 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 MANBAO00462 879 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 PROM1O43490 865 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 SH3BGRLO75368 114 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 CDC123O75794 336 aaPredicted RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 PDYNP01213 254 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 NR1D1P20393 614 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 ARL1P40616 181 aaPredicted RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 CASRP41180 1078 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 SSR2P43308 183 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 RAP1GDS1P52306 607 aa11.33□□□□□ -0.6
HPS1-206ENST00000462743 HNRNPFP52597 415 aaKnown RBP11.33□□□□□ -0.6
HPS1-206ENST00000462743 IGLV3-21P80748 117 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms