RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 METTL4Q8N3J2 472 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TMEM102Q8N9M5 508 aaPredicted RBP10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 RAB3IL1Q8TBN0 382 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 APOBEC4Q8WW27 367 aaKnown RBP10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 FER1L6-AS2Q96M78 137 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 HBEGFQ99075 208 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ZNF717Q9BY31 904 aaPredicted RBP10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 MRPL1Q9BYD6 325 aaKnown RBP10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 RBCK1Q9BYM8 510 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ACPTQ9BZG2 426 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SHCBP1LQ9BZQ2 653 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 DDX31Q9H8H2 851 aaKnown RBP10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 MLXIPLQ9NP71 852 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 LANCL2Q9NS86 450 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 PHF11Q9UIL8 331 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ADAM29Q9UKF5 820 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 MMACHCQ9Y4U1 282 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 HS3ST3B1Q9Y662 390 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 NBEAQ8NFP9 2946 aa10.99□□□□□ -0.65
TRAF3IP1-204ENST00000462122 A0A0A6YYD5 115 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 A0A1W2PQ72 361 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ARHGAP10A1A4S6 786 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CLDN4O14493 209 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SOCS6O14544 535 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 PRMT3O60678 531 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 DNAJB6O75190 326 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CDC123O75794 336 aaPredicted RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 RSL1D1O76021 490 aaKnown RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 HSPA4LO95757 839 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ACPPP15309 386 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 BUD31P41223 144 aaPredicted RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 HSD17B7P56937 341 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 WDR4P57081 412 aaKnown RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ABCE1P61221 599 aaKnown RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 RHAGQ02094 409 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TBL3Q12788 808 aaKnown RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SLAMF1Q13291 335 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TBR1Q16650 682 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 IMPG1Q17R60 797 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SPIN4Q56A73 249 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SH2D4BQ5SQS7 431 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CLEC6AQ6EIG7 209 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CYP20A1Q6UW02 462 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TMEM205Q6UW68 189 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 COMMD6Q7Z4G1 85 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TRIM46Q7Z4K8 759 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 APLFQ8IW19 511 aaPredicted RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TRIM42Q8IWZ5 723 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CLEC1AQ8NC01 280 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 PLPP5Q8NEB5 264 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 C7orf57Q8NEG2 295 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 MGARPQ8TDB4 240 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 MAPKAP1Q9BPZ7 522 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SORBS1Q9BX66 1292 aaKnown RBP10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TNFRSF12AQ9NP84 129 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 PRDM9Q9NQV7 894 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ZNF446Q9NWS9 450 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 P4HTMQ9NXG6 502 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 KCMF1Q9P0J7 381 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 FBXW2Q9UKT8 454 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 LHX6Q9UPM6 363 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TRAF6Q9Y4K3 522 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 KCNMB2Q9Y691 235 aa10.98□□□□□ -0.65
TRAF3IP1-204ENST00000462122 LOC102723996A0A087X1L8 192 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ARGFXA6NJG6 315 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ERVH48-1M5A8F1 160 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CYR61O00622 381 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 B4GALT2O60909 372 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 GUCY1B2O75343 617 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 EEDO75530 441 aaKnown RBP10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 FAM58BPP0C7Q3 252 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 BGNP21810 368 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CPN2P22792 545 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SERPINB3P29508 390 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TLX1P31314 330 aaPredicted RBP10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ARRB2P32121 409 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 EFNA3P52797 238 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ACSM2AQ08AH3 577 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 STX3Q13277 289 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 NSDHLQ15738 373 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ATG16L1Q676U5 607 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ACSM2BQ68CK6 577 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 MRM1Q6IN84 353 aaKnown RBP10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 KIRREL2Q6UWL6 708 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 GPR180Q86V85 440 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TMEM151BQ8IW70 566 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 SHISA5Q8N114 240 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 EFCAB3Q8N7B9 438 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 FAM47BQ8NA70 645 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 OR11G2Q8NGC1 345 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CHTF18Q8WVB6 975 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 TTC9Q92623 222 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 EXTL1Q92935 676 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 METTL2AQ96IZ6 378 aaKnown RBP10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 PTCHD1Q96NR3 888 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 CCT7Q99832 543 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 ING2Q9H160 280 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 WDR41Q9HAD4 459 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 PFDN4Q9NQP4 134 aa10.97□□□□□ -0.65
TRAF3IP1-204ENST00000462122 PRTFDC1Q9NRG1 225 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms