RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 SERINC2Q96SA4 455 aa17.26■□□□□ 0.35
COL9A2-205ENST00000461118 MS4A8Q9BY19 250 aa17.26■□□□□ 0.35
COL9A2-205ENST00000461118 MRPL46Q9H2W6 279 aaKnown RBP17.26■□□□□ 0.35
COL9A2-205ENST00000461118 IPPKQ9H8X2 491 aa17.26■□□□□ 0.35
COL9A2-205ENST00000461118 PRDM7Q9NQW5 492 aa17.26■□□□□ 0.35
COL9A2-205ENST00000461118 C2CD3Q4AC94 2353 aa17.26■□□□□ 0.35
COL9A2-205ENST00000461118 AKAP9Q99996 3911 aa17.26■□□□□ 0.35
COL9A2-205ENST00000461118 IGKV3D-11A0A0A0MRZ8 115 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 FAM227AF5H4B4 570 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 B3GALT2O43825 422 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 SIX3O95343 332 aaPredicted RBP17.25■□□□□ 0.35
COL9A2-205ENST00000461118 CELA2AP08217 269 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 SBK3P0C264 359 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 ITGAMP11215 1152 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 PIK3CBP42338 1070 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 MTTPP55157 894 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 PER3P56645 1201 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 BTG2P78543 158 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 EXT1Q16394 746 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 H3F3CQ6NXT2 135 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 CHSY3Q70JA7 882 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 GOLGA7Q7Z5G4 137 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 UBE3DQ7Z6J8 389 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 PTGR2Q8N8N7 351 aaPredicted RBP17.25■□□□□ 0.35
COL9A2-205ENST00000461118 L3MBTL4Q8NA19 623 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 CATSPER1Q8NEC5 780 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 ADAMTS18Q8TE60 1221 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 CMTM7Q96FZ5 175 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 SCYL1Q96KG9 808 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 PTCHD1Q96NR3 888 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 KCNC2Q96PR1 638 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 PHF12Q96QT6 1004 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 LPAR4Q99677 370 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 CCDC77Q9BR77 488 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 TBCDQ9BTW9 1192 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 ROGDIQ9GZN7 287 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 ACTR8Q9H981 624 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 PRDM9Q9NQV7 894 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 XPR1Q9UBH6 696 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 MMACHCQ9Y4U1 282 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 PCDHGA11Q9Y5H2 935 aa17.25■□□□□ 0.35
COL9A2-205ENST00000461118 A0A0G2JN53 185 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 IQANK1A0A1B0GTG1 560 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 TCRBV16S1A1N1A0A5B0 115 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 H0YIV9 168 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 SMIM24O75264 130 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 GRNP28799 593 aaKnown RBP17.24■□□□□ 0.35
COL9A2-205ENST00000461118 EEF1DP29692 281 aaKnown RBP17.24■□□□□ 0.35
COL9A2-205ENST00000461118 TDGF1P3P51864 188 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 RAB38P57729 211 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 OR4D2P58180 307 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 ACTN3Q08043 901 aaPredicted RBP17.24■□□□□ 0.35
COL9A2-205ENST00000461118 BTBD16Q32M84 506 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 DEPDC1Q5TB30 811 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 RPUSD3Q6P087 351 aaKnown RBP17.24■□□□□ 0.35
COL9A2-205ENST00000461118 PAPD4Q6PIY7 484 aaKnown RBP17.24■□□□□ 0.35
COL9A2-205ENST00000461118 LINC00696Q6ZRV3 163 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 GSPT2Q8IYD1 628 aaKnown RBP17.24■□□□□ 0.35
COL9A2-205ENST00000461118 SIRT6Q8N6T7 355 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 AMER2Q8N7J2 671 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 ACMSDQ8TDX5 336 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 HAS2Q92819 552 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 PHF21BQ96EK2 531 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 NTMT1Q9BV86 223 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 MMP25Q9NPA2 562 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 PSD3Q9NYI0 1048 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 PTGFRNQ9P2B2 879 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 PSMC3IPQ9P2W1 217 aaPredicted RBP17.24■□□□□ 0.35
COL9A2-205ENST00000461118 DAPP1Q9UN19 280 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 PKDREJQ9NTG1 2253 aa17.24■□□□□ 0.35
COL9A2-205ENST00000461118 HIVEP1P15822 2718 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-205ENST00000461118 SCELO95171 688 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 TGFB1P01137 390 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 PCNAP12004 261 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 ARFIP1P53367 373 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 HSD17B7P56937 341 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 TLR1Q15399 786 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 KHDRBS2Q5VWX1 349 aaKnown RBP17.23■□□□□ 0.35
COL9A2-205ENST00000461118 FJX1Q86VR8 437 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 SCUBE1Q8IWY4 988 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 MCEMP1Q8IX19 187 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 ZNF595Q8IYB9 648 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 ARMC2Q8NEN0 867 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 HUS1BQ8NHY5 278 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 MZB1Q8WU39 189 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 RELTQ969Z4 430 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 REPS1Q96D71 796 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 CNDP1Q96KN2 507 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 C1QTNF3Q9BXJ4 246 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 RNF32Q9H0A6 362 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 NOL11Q9H8H0 719 aaKnown RBP17.23■□□□□ 0.35
COL9A2-205ENST00000461118 ANKZF1Q9H8Y5 726 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 COPS7BQ9H9Q2 264 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-205ENST00000461118 LYRM4Q9HD34 91 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 NECTIN3Q9NQS3 549 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 KCMF1Q9P0J7 381 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 TEKT2Q9UIF3 430 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 PCTPQ9UKL6 214 aa17.23■□□□□ 0.35
COL9A2-205ENST00000461118 NCOA6Q14686 2063 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms