RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 RFPL2O75678 378 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ALPPL2P10696 532 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 SYN1P17600 705 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 RHCEP18577 417 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 OXTRP30559 389 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 SHMT2P34897 504 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 PMS2P3Q13401 168 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ENPP2Q13822 863 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 DSG2Q14126 1118 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 C6orf120Q7Z4R8 191 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 TSPYL5Q86VY4 417 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 LINC01465Q8N7H1 131 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 FUNDC2Q9BWH2 189 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 KLF16Q9BXK1 252 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-205ENST00000460170 GSDMCQ9BYG8 508 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
PTPRU-205ENST00000460170 ARNTLO00327 626 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF821O75541 412 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 RAB36O95755 333 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 DCTP40126 519 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ABATP80404 500 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 GRM2Q14416 872 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 GPR26Q8NDV2 337 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ZSWIM3Q96MP5 696 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 DGAT2Q96PD7 388 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 WDR83Q9BRX9 315 aaKnown RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 C1QTNF1Q9BXJ1 281 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 RDH14Q9HBH5 336 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 AGPAT4Q9NRZ5 378 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ACSL6Q9UKU0 697 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 PCDHGA2Q9Y5H1 932 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 FAM25EA8MYX2 175 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 E7EQ34 232 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 RENP00797 406 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ASGR2P07307 311 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 GSTM4Q03013 218 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 WSCD2Q2TBF2 565 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 OR52E8Q6IFG1 317 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 LSMEM2Q8N112 164 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 PJA1Q8NG27 643 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 OR8H1Q8NGG4 311 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 TNFAIP8L1Q8WVP5 186 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 GPER1Q99527 375 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 DSN1Q9H410 356 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 Q9N2J8 555 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 STOX2Q9P2F5 926 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 CDH7Q9ULB5 785 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 MRPS17Q9Y2R5 130 aaKnown RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 FOXD2O60548 495 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 C6P13671 934 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 CRISP1P54107 249 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 FAM189BP81408 668 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF45Q02386 682 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 CD47Q08722 323 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 FCHO2Q0JRZ9 810 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 SEMA3BQ13214 749 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 LINGO2Q7L985 606 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 GNPDA2Q8TDQ7 276 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 INPP5KQ9BT40 448 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ASPNQ9BXN1 380 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 CLCA3PQ9Y6N3 262 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 SLX4Q8IY92 1834 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 B4DGG1 531 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 TFPTP0C1Z6 253 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ITPRIPL2Q3MIP1 535 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 GRHL2Q6ISB3 625 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 OR4K14Q8NGD5 310 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 OR8J1Q8NGP2 316 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 TFAP2CQ92754 450 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 TMIGD2Q96BF3 282 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 RTCAO00442 366 aaKnown RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 TACSTD2P09758 323 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 IFI30P13284 250 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF823P16415 610 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 SLC36A3Q495N2 470 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 SLC27A4Q6P1M0 643 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF517Q6ZMY9 492 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 FRS2Q8WU20 508 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 PMEPA1Q969W9 287 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 ABCG4Q9H172 646 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 HEBP1Q9NRV9 189 aa14.17□□□□□ -0.14
PTPRU-205ENST00000460170 EXOSC1Q9Y3B2 195 aaKnown RBP14.17□□□□□ -0.14
PTPRU-205ENST00000460170 MROH6A6NGR9 719 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 ATP5A1P25705 553 aaKnown RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 NFATC3Q12968 1075 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 COMMD6Q7Z4G1 85 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 ZNF527Q8NB42 609 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 OR52N2Q8NGI0 321 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 SMIM14Q96QK8 99 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 MGLLQ99685 303 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 SH3PXD2BA1X283 911 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 UGDHO60701 494 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 MITFO75030 526 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 NOS1APO75052 506 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 ARL6IP5O75915 188 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 LDOC1O95751 146 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-205ENST00000460170 STSP08842 583 aa14.16□□□□□ -0.14
PTPRU-205ENST00000460170 ALDOCP09972 364 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms