RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 OR1A2Q9Y585 309 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 HSPE1-MOB4S4R3N1 261 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 LTBP2Q14767 1821 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 GADD45GO95257 159 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 IGFBP1P08833 259 aaPredicted RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 GADD45AP24522 165 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 ITGB7P26010 798 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 GGT2P36268 569 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 CTSKP43235 329 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 HNRNPFP52597 415 aaKnown RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 MAPK12P53778 367 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 MANFP55145 182 aaKnown RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 MICAQ29983 383 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 BCL7AQ4VC05 210 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 C1orf53Q5VUE5 145 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 ADGRF3Q8IZF5 1079 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 CLIP4Q8N3C7 705 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 CPA6Q8N4T0 437 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 OXR1Q8N573 874 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 CELF5Q8N6W0 485 aaKnown RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 SMG7Q92540 1137 aaKnown RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 EHD1Q9H4M9 534 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 ZNF556Q9HAH1 456 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 C11orf16Q9NQ32 467 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 SAGE1Q9NXZ1 904 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 GLOD5A6NK44 160 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 FOXE1O00358 373 aaPredicted RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 TPST2O60704 377 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 PAPLNO95428 1278 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 FGF19O95750 216 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 ALPPL2P10696 532 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 TGFBR2P37173 567 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 CXCR4P61073 352 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 TP53BP2Q13625 1128 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 TIGD6Q17RP2 521 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 HNRNPA1L2Q32P51 320 aaKnown RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 ZNF605Q86T29 641 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 GPR65Q8IYL9 337 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 STX19Q8N4C7 294 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 HORMAD2Q8N7B1 307 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 ANKRD53Q8N9V6 530 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 PITX2Q99697 317 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 FAM83CQ9BQN1 747 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 C6orf62Q9GZU0 229 aaPredicted RBP17.31■□□□□ 0.36
HPS3-202ENST00000460120 ITM2CQ9NQX7 267 aa17.31■□□□□ 0.36
HPS3-202ENST00000460120 TCF20Q9UGU0 1960 aaKnown RBP17.3■□□□□ 0.36
HPS3-202ENST00000460120 IGLON5A6NGN9 336 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 CBFA2T3O75081 653 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
HPS3-202ENST00000460120 PCDH8O95206 1070 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 ACADLP28330 430 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 DSTNP60981 165 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 FCHO2Q0JRZ9 810 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 RBM45Q8IUH3 476 aaKnown RBP17.3■□□□□ 0.36
HPS3-202ENST00000460120 AMER3Q8N944 861 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 OR2L2Q8NH16 312 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 ZNF707Q96C28 371 aaPredicted RBP17.3■□□□□ 0.36
HPS3-202ENST00000460120 IL4I1Q96RQ9 567 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 GABARAPL3Q9BY60 117 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 NLNQ9BYT8 704 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 CCNB1IP1Q9NPC3 277 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 MYNNQ9NPC7 610 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 MS4A12Q9NXJ0 267 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 ZNF226Q9NYT6 803 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 PTPRSQ13332 1948 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 C5orf58C9J3I9 102 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 AIREO43918 545 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 MAGP20916 626 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 ELP6Q0PNE2 266 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 AMZ2Q86W34 360 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 PSMA8Q8TAA3 256 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 DYNC2LI1Q8TCX1 351 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 CHPT1Q8WUD6 406 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 ALPK1Q96QP1 1244 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 SPATA9Q9BWV2 254 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 ITPAQ9BY32 194 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 DCSTAMPQ9H295 470 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 EPS8L2Q9H6S3 715 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 CTPS2Q9NRF8 586 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 MOSPD1Q9UJG1 213 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 PCDHGA2Q9Y5H1 932 aa17.3■□□□□ 0.36
HPS3-202ENST00000460120 M0R082 166 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 PI15O43692 258 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 GASTP01350 101 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 GRK5P34947 590 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 P2RY2P41231 377 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 FAM78AQ5JUQ0 283 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 DEF8Q6ZN54 512 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 SLC9B2Q86UD5 537 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 C17orf64Q86WR6 236 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 DNAJC22Q8N4W6 341 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 OR4C15Q8NGM1 316 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 OTUB2Q96DC9 234 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 OR52A5Q9H2C5 316 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 AKIP1Q9NQ31 210 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 ACER3Q9NUN7 267 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 ANGPT4Q9Y264 503 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 CARNS1A5YM72 827 aa17.29■□□□□ 0.36
HPS3-202ENST00000460120 PTHP01270 115 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms