RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MESP1Q9BRJ9 268 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 SORBS1Q9BX66 1292 aaKnown RBP9.48□□□□□ -0.89
ATG4A-206ENST00000457035 SHCBP1LQ9BZQ2 653 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 ROGDIQ9GZN7 287 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 VN1R1Q9GZP7 353 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 DDX31Q9H8H2 851 aaKnown RBP9.48□□□□□ -0.89
ATG4A-206ENST00000457035 BRF2Q9HAW0 419 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 SEMA3GQ9NS98 782 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 C14orf105Q9NVL8 296 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 C3orf18Q9UK00 162 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 DAPP1Q9UN19 280 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 POLHQ9Y253 713 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 SPTA1P02549 2419 aa9.48□□□□□ -0.89
ATG4A-206ENST00000457035 TNRC6AQ8NDV7 1962 aaKnown RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 A0A088AWK7 358 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 UQCRHLA0A096LP55 91 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 FAM227AF5H4B4 570 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 CYR61O00622 381 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 SOCS6O14544 535 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 B3GALT2O43825 422 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 EEDO75530 441 aaKnown RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 SEMA3DO95025 777 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 IGHEP01854 428 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 ITGB2P05107 769 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 UQCRHP07919 91 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 FHP07954 510 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 UROSP10746 265 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 RNH1P13489 461 aaKnown RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 HSD3B1P14060 373 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 PLA2G2AP14555 144 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 CHN1P15882 459 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 ZNF10P21506 573 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 HSD3B2P26439 372 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 CERS1P27544 350 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 HMOX2P30519 316 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 OTX2P32243 289 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 SERPINB5P36952 375 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 TSFMP43897 325 aaKnown RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 HTR6P50406 440 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 LIM2P55344 173 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 TBL3Q12788 808 aaKnown RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 RCN2Q14257 317 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 ABRAXAS2Q15018 415 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 TBR1Q16650 682 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 DEFB109BQ30KR1 87 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 LINC00303Q3SY05 128 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 UGT3A2Q3SY77 523 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 TUBB8Q3ZCM7 444 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 MRM1Q6IN84 353 aaKnown RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 PCSK4Q6UW60 755 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 TMEM205Q6UW68 189 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 CUZD1Q86UP6 607 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 RAB43Q86YS6 212 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 METTL4Q8N3J2 472 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 ZCCHC7Q8N3Z6 543 aaKnown RBP9.47□□□□□ -0.89
ATG4A-206ENST00000457035 ANKRD42Q8N9B4 389 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 TTC9Q92623 222 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 TBC1D20Q96BZ9 403 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 IP6K3Q96PC2 410 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 HBEGFQ99075 208 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 MAPKAP1Q9BPZ7 522 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 CENPKQ9BS16 269 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 CRB3Q9BUF7 120 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 LYRM4Q9HD34 91 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 MLXIPLQ9NP71 852 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 P4HTMQ9NXG6 502 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 MKL2Q9ULH7 1088 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 HS3ST3B1Q9Y662 390 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 KCNMB2Q9Y691 235 aa9.47□□□□□ -0.89
ATG4A-206ENST00000457035 A0A0A6YYD5 115 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ERVH48-1M5A8F1 160 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 AZIN1O14977 448 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ITM2AO43736 263 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ALOX12BO75342 701 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CDC123O75794 336 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 SERPINE1P05121 402 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 HEXBP07686 556 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CYC1P08574 325 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 SSR2P43308 183 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 RAP1GDS1P52306 607 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 HNRNPFP52597 415 aaKnown RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 RAB38P57729 211 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 BTG2P78543 158 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 RHAGQ02094 409 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 RHDQ02161 417 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CSTF3Q12996 717 aaKnown RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 SLAMF1Q13291 335 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ATP1A4Q13733 1029 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CHI3L2Q15782 390 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 HHATQ5VTY9 493 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CLEC6AQ6EIG7 209 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 SCIMPQ6UWF3 145 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 TRIM46Q7Z4K8 759 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 MRGPREQ86SM8 312 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 APLFQ8IW19 511 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CLYBLQ8N0X4 340 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 GBP7Q8N8V2 638 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 TMEM52Q8NDY8 209 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 OR11G2Q8NGC1 345 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CHTF18Q8WVB6 975 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms