RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 KIAA1191Q96A73 305 aa11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 THAP7Q9BT49 309 aaPredicted RBP11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 SYNDIG1Q9H7V2 258 aa11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 MCCC2Q9HCC0 563 aa11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 GALNT9Q9HCQ5 603 aa11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 C14orf105Q9NVL8 296 aa11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 TMPRSS11EQ9UL52 423 aa11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 PCDHAC2Q9Y5I4 1007 aa11.91□□□□□ -0.5
NEDD4L-208ENST00000456173 GTPBP1O00178 669 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 PRKYO43930 277 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 GATBO75879 557 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 GIFP27352 417 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CNR2P34972 360 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 MAP3K8P41279 467 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 KCNQ1P51787 676 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CRISP3P54108 245 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 POU4F2Q12837 409 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 PTPRCAPQ14761 206 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 MEDAGQ5VYS4 303 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 HLA-DQA1Q5Y7H0 255 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 C17orf64Q86WR6 236 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 C2CD4AQ8NCU7 369 aaPredicted RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 OR5T3Q8NGG3 340 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 C2CD4CQ8TF44 421 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 ZDHHC1Q8WTX9 485 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 ARHGAP39Q9C0H5 1083 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 REEP4Q9H6H4 257 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 DNMT3LQ9UJW3 386 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 MED31Q9Y3C7 131 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 A0A1W2PQH9 124 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 H7C4K7 107 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 HPGDSO60760 199 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 KRT33AO76009 404 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CKBP12277 381 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SOX2P48431 317 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SH3BP2P78314 561 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SLC35G1Q2M3R5 365 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CEACAM20Q6UY09 585 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CILP2Q8IUL8 1156 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 LAX1Q8IWV1 398 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CDKN2AIPNLQ96HQ2 116 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 METTL17Q9H7H0 456 aaPredicted RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 ZNF541Q9H0D2 1346 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SMCO3A2RU48 225 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 RHPN2P1A8MT19 583 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 TBL1XO60907 577 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SLC25A12O75746 678 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SNAPINO95295 136 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CERS1P27544 350 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 STXBP1P61764 594 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 FRG2Q64ET8 278 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 NADSYN1Q6IA69 706 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 FRG2BQ96QU4 278 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 RAD9AQ99638 391 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 DHRS4Q9BTZ2 278 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 DOHHQ9BU89 302 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 WDR45Q9Y484 360 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 TRAV20A0A0B4J274 112 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 XKRYO14609 159 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 GMFGO60234 142 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 PRAMEF2O60811 474 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 GBAP04062 536 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 CDK1P06493 297 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SFTPBP07988 381 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SNRNP70P08621 437 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 ACPPP15309 386 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 PBX3P40426 434 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 XKR4Q5GH76 650 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SLC22A10Q63ZE4 541 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 SERPINA13PQ6UXR4 307 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 RANBP3LQ86VV4 465 aaPredicted RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 LNX2Q8N448 690 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 OR7D4Q8NG98 312 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 OR14K1Q8NGZ2 314 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 STK35Q8TDR2 534 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 TRIB2Q92519 343 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 HOXD1Q9GZZ0 328 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 IFT22Q9H7X7 185 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 ZCCHC3Q9NUD5 404 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 PIGVQ9NUD9 493 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 EMCNQ9ULC0 261 aa11.9□□□□□ -0.5
NEDD4L-208ENST00000456173 UBR1Q8IWV7 1749 aa11.9□□□□□ -0.51
NEDD4L-208ENST00000456173 ARPC1BO15143 372 aaKnown RBP11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 CCND3P30281 292 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 DCCP43146 1447 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 OPCMLQ14982 345 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 GTDC1Q4AE62 458 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 C17orf107Q6ZR85 190 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 ZNF778Q96MU6 729 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 C11orf54Q9H0W9 315 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 KCNH6Q9H252 994 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 CLDN24A6NM45 220 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 SC5DO75845 299 aa11.89□□□□□ -0.51
NEDD4L-208ENST00000456173 RHOQP17081 205 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms