RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 PACRGLQ8N7B6 248 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 AMER2Q8N7J2 671 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 ZNF615Q8N8J6 731 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CCDC74AQ96AQ1 378 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PHF21BQ96EK2 531 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 DHRS1Q96LJ7 313 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 C12orf66Q96MD2 445 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 FRG2BQ96QU4 278 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 MBOAT4Q96T53 435 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CSF3RQ99062 836 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SLC29A1Q99808 456 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 THTPAQ9BU02 230 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PCBD2Q9H0N5 130 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 RPF2Q9H7B2 306 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 BATF3Q9NR55 127 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 USE1Q9NZ43 259 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 TMEFF2Q9UIK5 374 aaPredicted RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 TLK1Q9UKI8 766 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PACSIN3Q9UKS6 424 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SATB2Q9UPW6 733 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CFAP20Q9Y6A4 193 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 A0A1W2PR48 441 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 TLCD2A6NGC4 264 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PDE5AO76074 875 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 UMODP07911 640 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PABPC4LP0CB38 370 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 FOLR1P15328 257 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 TSPAN8P19075 237 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CYP2A7P20853 494 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 MNAT1P51948 309 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CCL7P80098 99 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 GAB1Q13480 694 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 FHL1Q13642 323 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 FAM53BQ14153 422 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SF1Q15637 639 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 CRB2Q5IJ48 1285 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 B3GNT8Q7Z7M8 397 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 ZC3H7AQ8IWR0 971 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 TTC16Q8NEE8 873 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 ZNF675Q8TD23 568 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 MIEF2Q96C03 454 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 EGLN2Q96KS0 407 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PRRX2Q99811 253 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 EFCAB11Q9BUY7 163 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SLC25A23Q9BV35 468 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SMOC1Q9H4F8 434 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 XKR8Q9H6D3 395 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SPAG4Q9NPE6 437 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SEMA4BQ9NPR2 832 aaPredicted RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 FKBP14Q9NWM8 211 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 FBXL21Q9UKT6 434 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 RUVBL1Q9Y265 456 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 TIMM22Q9Y584 194 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 DPPA5A6NC42 116 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 GABRR3A8MPY1 467 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 B4E171 279 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 C9orf172C9J069 976 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CFAP99D6REC4 459 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SOCS2O14508 198 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SCAMP2O15127 329 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 UBDO15205 165 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 BNIP3LO60238 219 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PRMT3O60678 531 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 RASAL1O95294 804 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 LYNP07948 512 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 HTR1AP08908 422 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PCSK2P16519 638 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 ZNF28P17035 718 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CSRP1P21291 193 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 ATP5A1P25705 553 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 TSPAN7P41732 249 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PIK3CGP48736 1102 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 LIM2P55344 173 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 OR1D5P58170 312 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PPP2R2BQ00005 443 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 LAPTM5Q13571 262 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PRICKLE4Q2TBC4 344 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PRRT3Q5FWE3 981 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 NANOGP8Q6NSW7 305 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 TMEM81Q6P7N7 255 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 NHLRC1Q6VVB1 395 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PIWIL3Q7Z3Z3 882 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 TSPYL5Q86VY4 417 aaPredicted RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 GKN2Q86XP6 184 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 TRAPPC5Q8IUR0 188 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 NAXDQ8IW45 347 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SIMC1Q8NDZ2 872 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 FAM71CQ8NEG0 241 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 PYDC1Q8WXC3 89 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 MTERF3Q96E29 417 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CNRIP1Q96F85 164 aaPredicted RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 NUDT22Q9BRQ3 303 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 HGH1Q9BTY7 390 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 NANOGQ9H9S0 305 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 CLK4Q9HAZ1 481 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 EHD3Q9NZN3 535 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 SPASTQ9UBP0 616 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 BTNL2Q9UIR0 455 aa4.68□□□□□ -1.66
RIF1-207ENST00000454583 WBP11Q9Y2W2 641 aaKnown RBP4.68□□□□□ -1.66
RIF1-207ENST00000454583 R4GN57 208 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms