RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MILR1Q7Z6M3 343 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 SRRM1Q8IYB3 904 aaKnown RBP13.31□□□□□ -0.28
HDAC4-205ENST00000454542 ZNF595Q8IYB9 648 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 PSMF1Q92530 271 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 RGMAQ96B86 450 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 ZIM3Q96PE6 472 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 SERPINI1Q99574 410 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 CENPKQ9BS16 269 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 SORBS1Q9BX66 1292 aaKnown RBP13.31□□□□□ -0.28
HDAC4-205ENST00000454542 DDX31Q9H8H2 851 aaKnown RBP13.31□□□□□ -0.28
HDAC4-205ENST00000454542 BRF2Q9HAW0 419 aa13.31□□□□□ -0.28
HDAC4-205ENST00000454542 G3BP2Q9UN86 482 aaKnown RBP13.31□□□□□ -0.28
HDAC4-205ENST00000454542 BLACEA4D250 179 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 A6NL46 340 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 FAM227AF5H4B4 570 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 SAP18O00422 153 aaKnown RBP13.3□□□□□ -0.28
HDAC4-205ENST00000454542 PRMT3O60678 531 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 B4GALT2O60909 372 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 SH3BGRLO75368 114 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 OR4F21O95013 312 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 ESRRBO95718 433 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 ENO1P06733 434 aaKnown RBP13.3□□□□□ -0.28
HDAC4-205ENST00000454542 CELA2AP08217 269 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 HSD3B1P14060 373 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 ITGA3P26006 1051 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 HSD3B2P26439 372 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 HSD17B7P56937 341 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 BTG2P78543 158 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 C19orf57Q0VDD7 668 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 KLRB1Q12918 225 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 IFT88Q13099 833 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 RCN2Q14257 317 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 TERF2Q15554 542 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 NSDHLQ15738 373 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 KRT71Q3SY84 523 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 SFT2D3Q587I9 215 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 BEND6Q5SZJ8 279 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-205ENST00000454542 LIPMQ5VYY2 423 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 OR4C11Q6IEV9 310 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 PAPD4Q6PIY7 484 aaKnown RBP13.3□□□□□ -0.28
HDAC4-205ENST00000454542 LRIG3Q6UXM1 1119 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 GPRIN3Q6ZVF9 776 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 KBTBD2Q8IY47 623 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 FAM47BQ8NA70 645 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 PPP4R1Q8TF05 950 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 MAPKAP1Q9BPZ7 522 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 ELOVL6Q9H5J4 265 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 NECTIN3Q9NQS3 549 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 ANAPC2Q9UJX6 822 aa13.3□□□□□ -0.28
HDAC4-205ENST00000454542 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
HDAC4-205ENST00000454542 ZNF462Q96JM2 2506 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 IGHV3-20A0A0C4DH32 117 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 SERTM1A2A2V5 107 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 SAGE2PA6NJ88 616 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 H3BQF6 201 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 SUV39H1O43463 412 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 EEDO75530 441 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 SEC24DO94855 1032 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 ALPPP05187 535 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 CPA3P15088 417 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 CREB1P16220 341 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 MAOAP21397 527 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 ETV4P43268 484 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 RAP1GDS1P52306 607 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 HNRNPH2P55795 449 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 AP2B1P63010 937 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 IGLV3-21P80748 117 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 TNFRSF17Q02223 184 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 ZNF33BQ06732 778 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 CSTF3Q12996 717 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 RAPSNQ13702 412 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 EXT1Q16394 746 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 AP5B1Q2VPB7 878 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 TCHHL1Q5QJ38 904 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 JMJD6Q6NYC1 403 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 NUDT13Q86X67 352 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 PARP9Q8IXQ6 854 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 RBMXL3Q8N7X1 1067 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 CDYL2Q8N8U2 506 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 ARMC2Q8NEN0 867 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 THOC3Q96J01 351 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 PTCHD1Q96NR3 888 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 FAM111AQ96PZ2 611 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 LPAR4Q99677 370 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 SSU72Q9NP77 194 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 PRTFDC1Q9NRG1 225 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 FARSBQ9NSD9 589 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 LYARQ9NX58 379 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 PHF11Q9UIL8 331 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 ADAM29Q9UKF5 820 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 SNX6Q9UNH7 406 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 PPIEQ9UNP9 301 aaKnown RBP13.29□□□□□ -0.28
HDAC4-205ENST00000454542 SCN2AQ99250 2005 aa13.29□□□□□ -0.28
HDAC4-205ENST00000454542 MANBAO00462 879 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 TMPRSS11DO60235 418 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 DPM1O60762 260 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 ERLIN1O75477 346 aa13.28□□□□□ -0.28
HDAC4-205ENST00000454542 SORBS2O94875 1100 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms