RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CCDC73Q6ZRK6 1079 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 CPEB2Q7Z5Q1 589 aaKnown RBP4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 TAX1BP1Q86VP1 789 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 LACC1Q8IV20 430 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 FBXW8Q8N3Y1 598 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 TMEM251Q8N6I4 163 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 ZDHHC22Q8N966 263 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 ELP5Q8TE02 316 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 C10orf105Q8TEF2 133 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 NTAN1Q96AB6 310 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 TBC1D31Q96DN5 1066 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 C12orf66Q96MD2 445 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 NUDCD1Q96RS6 583 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 GPHA2Q96T91 129 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 CYTH2Q99418 400 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 TTTY12Q9BZ98 90 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 WWP1Q9H0M0 922 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 ACP6Q9NPH0 428 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 ZIM2Q9NZV7 527 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 PPP4R1LQ9P1A2 415 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 KLHL21Q9UJP4 597 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 IKZF3Q9UKT9 509 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 FRMD4BQ9Y2L6 1034 aa4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 MAGED1Q9Y5V3 778 aaPredicted RBP4.77□□□□□ -1.65
SBDSP1-204ENST00000453858 G3V4G9 280 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 NDC80O14777 642 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 KPNA5O15131 536 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 GPR42O15529 346 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 SGTAO43765 313 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 HCN1O60741 890 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 TPBGLP0DKB5 382 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 C8orf89P0DMQ9 161 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 HOXA5P20719 270 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 TBXAS1P24557 533 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 CCKARP32238 428 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 MAGEA5P43359 124 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 MXI1P50539 228 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 SRSF4Q08170 494 aaKnown RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 AP1B1Q10567 949 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 STK4Q13043 487 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 XRCC4Q13426 336 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 RFTN1Q14699 578 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC10A1Q14973 349 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 ANKRD1Q15327 319 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 PGGHGQ32M88 737 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 FAM214AQ32MH5 1076 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 P3H1Q32P28 736 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 THEMIS2Q5TEJ8 643 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 NXNQ6DKJ4 435 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 FAM111BQ6SJ93 734 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 LANCL3Q6ZV70 420 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 LUZP2Q86TE4 346 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 AMIGO1Q86WK6 493 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC5A8Q8N695 610 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 PAF1Q8N7H5 531 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 RASGEF1AQ8N9B8 481 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 GPR26Q8NDV2 337 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 OR2M7Q8NG81 312 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 NRG4Q8WWG1 115 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 AKAP1Q92667 903 aaKnown RBP eCLIP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 ANKRD9Q96BM1 317 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 ARL8AQ96BM9 186 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 C11orf24Q96F05 449 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 RMDN2Q96LZ7 410 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 LRRC37BQ96QE4 947 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 LLPHQ9BRT6 129 aaKnown RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 NUP85Q9BW27 656 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC39A8Q9C0K1 460 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 MEGF9Q9H1U4 602 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 XKR8Q9H6D3 395 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 ACSS1Q9NUB1 689 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 STOX2Q9P2F5 926 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 FBXO2Q9UK22 296 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 TRAF3IP3Q9Y228 551 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 COLEC10Q9Y6Z7 277 aa4.76□□□□□ -1.65
SBDSP1-204ENST00000453858 UBE2QL1A1L167 161 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 CD8B2A6NJW9 211 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 ARHGEF33A8MVX0 844 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 EPB41L2O43491 1005 aaKnown RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 MFAP3LO75121 409 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 PF4V1P10720 104 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 NDUFS1P28331 727 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 PEBP1P30086 187 aaKnown RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 UGT2B10P36537 528 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 STAT6P42226 847 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 MAN2A2P49641 1150 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 KIF5AQ12840 1032 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 LRMPQ12912 555 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 DUSP8Q13202 625 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 SP140Q13342 867 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 PDK1Q15118 436 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 EXT1Q16394 746 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 PTPN20Q4JDL3 420 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 ARMC12Q5T9G4 340 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 NDUFAF5Q5TEU4 345 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 PDPK2PQ6A1A2 396 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 UNC13DQ70J99 1090 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 POLNQ7Z5Q5 900 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms